Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4570 ATGGCTTCCTATTCTTTCCCTTCTTCATCACCACCATCCTCAATTGCTTCTCCAAAATCTAGCATGTTTTATTATGCTATAAGTGAAGATTCCTATGAGGAACCTCACTTCCTTCAATCCTGTTTTCTTTGCAGAAAGACTCTTGGCCAAAACAAAGACATCTTTATGTACAGAGGGAACACACCATTCTGTAGCAAAGAGTGCAGAGAGGAGCAGATAGAGATTGATGAGGCCAAAGAGAAAAGCTGGAAGCGTTCTTCCAAAAGGGGTGTTAGACAATCAGAGAATAATCAAAATTCCACAACCAATAAGGCTGTGGGAAGAACAGGAACAGTTGCAGTGGCCTGA 348 0.4167 MASYSFPSSSPPSSIASPKSSMFYYAISEDSYEEPHFLQSCFLCRKTLGQNKDIFMYRGNTPFCSKECREEQIEIDEAKEKSWKRSSKRGVRQSENNQNSTTNKAVGRTGTVAVA* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4570 115 MobiDBLite consensus disorder prediction 76 91 - -
Lja3g4570 115 Pfam zinc-finger of the FCS-type, C2-C2 30 79 IPR007650 -
Lja3g4570 115 MobiDBLite consensus disorder prediction 92 108 - -
Lja3g4570 115 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 19 115 IPR044533 -
Lja3g4570 115 ProSiteProfiles Zinc finger FLZ-type profile. 36 80 IPR007650 -
Lja3g4570 115 MobiDBLite consensus disorder prediction 76 115 - -
Lja3g4570 115 PANTHER FCS-LIKE ZINC FINGER 3 19 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4570 Lja-Chr3 87578533 87579549 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4570 - - gmx:100499981 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4570 3 87578533 87579549 Lja3g4570 3 87578533 87579549 ECH