Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4565 ATGGAGAAGAAAATTCACATTGCAGTTGTTCCTAGTATTGGGTTCAGCCATTTAGCTCCTATTCTTCAGTTCTCCAAGCGACTTGTTCACCTCCATCCACACTTTCATGTCACATGCCTCATTCCCTCACTTGGGTCTCCCCCACTTGCCTCACAAACCATCCTTCAAAACCTTCCACCAAACATCACCTACACATTCCTTCCACCGGTTAACCCCAACGACCTACCACAAGGGATTGACATTGTAATCCAAATTCAGCTTACTTTGACTCACTCTCTGCCATCTATACACCAAGCCTTAAACTCCTTAACTATAAGGATACCCCATGTCGCCTTGGTGGTTGATTCTTTAGCCCTTGTAGCACTAGATTTTGCTCAAGAGTTTAACATGTTGTCCTATGTTTACTTCCCTGCAGCAGCTACCACACTCTCTCTGCACTTCTATGTGCCCAAATTGGATAAGGAAACATCATGTGAGTATCGAGATTTACCAGACCCTATTCAAATACCAGGTTGTGTACCACTTCATGGTAAAGATCTCTACACCCCAGCTCAAGAACGTTCTGGTCAAACTTACCAATCCTTGCTACAACGCATTAATCGATATTGTTCTGTTGATGGGGTTTTTGTTAACAGCTTTCTAGAATTGGAAACAGGGCCTATAAGAGCACTGACTGAGGAGGGAAGAGGATACCCTCCTGTGTACCCTGTTGGACCTATTATCCAAGCAGGAGCAAAATCTAGTGATGATGATGATGCAAATAGGTTAAAATTGAAGTGTCTAGCATGGTTGGACTTACAGCAACCTTGTTCTGTTTTGTATGTTTCGTTTGGGAGTGGTGGAACACTGTCACTTGAGCAAACTCTTGAGCTGGCTCTGGGTTTGGAGTTGAGTAATCATAAGTTCTTATGGGTTGTAAGAGCACCAAGTAGTTCAGCCAGTGGTGCGTATCTTTCAGCTCAAAATGATGATGACCCTTTGCAATTTTTACCTTCTGGGTTCTTGGAGAGAACAAAGGGGCAAGGTTTGGTTATTCCATCATGGGCACCCCAGATTGAAATTCTCAGTCACTGTTCAGTTGGTGGGTTCTTGAGTCACTGTGGCTGGAACTCAACCCTTGAAAGTGTGGTCCATGGTGTACCATTAATCACATGGCCTCTGTTTGCTGAGCAGAGGATGAATGCTGTTTTGCTATGTGATGGCCTCAAAGTGGGACTGAGGCCACGAGTTGGTGAAAATGGCTTGGTGGAAAGGGTAGAAGTTGCTGAGGTGGTGAAGTGTCTTATGGAGAGGGAAGAAGGTGGGAAATTGCACAGAAGAATGAAGGAGTTAAAAGAAGCTGCTAGTAATGCACTCAAAGAAGATGGATCTTCTACAAAGACTCTTTCTCAATTAATACTCAAGTGGAAAAAATTGGTATAG 1422 0.4374 MEKKIHIAVVPSIGFSHLAPILQFSKRLVHLHPHFHVTCLIPSLGSPPLASQTILQNLPPNITYTFLPPVNPNDLPQGIDIVIQIQLTLTHSLPSIHQALNSLTIRIPHVALVVDSLALVALDFAQEFNMLSYVYFPAAATTLSLHFYVPKLDKETSCEYRDLPDPIQIPGCVPLHGKDLYTPAQERSGQTYQSLLQRINRYCSVDGVFVNSFLELETGPIRALTEEGRGYPPVYPVGPIIQAGAKSSDDDDANRLKLKCLAWLDLQQPCSVLYVSFGSGGTLSLEQTLELALGLELSNHKFLWVVRAPSSSASGAYLSAQNDDDPLQFLPSGFLERTKGQGLVIPSWAPQIEILSHCSVGGFLSHCGWNSTLESVVHGVPLITWPLFAEQRMNAVLLCDGLKVGLRPRVGENGLVERVEVAEVVKCLMEREEGGKLHRRMKELKEAASNALKEDGSSTKTLSQLILKWKKLV* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4565 473 Gene3D Glycogen Phosphorylase B; 6 458 - -
Lja3g4565 473 ProSitePatterns UDP-glycosyltransferases signature. 348 391 IPR035595 -
Lja3g4565 473 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 472 - -
Lja3g4565 473 CDD GT1_Gtf-like 6 412 IPR002213 GO:0008194
Lja3g4565 473 PANTHER GLYCOSYLTRANSFERASE 1 472 - -
Lja3g4565 473 Gene3D Glycogen Phosphorylase B; 252 453 - -
Lja3g4565 473 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 271 396 IPR002213 GO:0008194
Lja3g4565 473 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4565 Lja-Chr3 87512179 87514083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4565 6 470 Glycosyltransferase AT1G01420 48.608 1.81e-161 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4565 K08237 - gmx:100778639 667.922