Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4561 ATGGGAACCAATGCTACAAGTGAAGTGGCTAACTTTCACTATATGCTGAGTGAACGAAAAGCCTTTGATGAAACAAAAGCTGGTGTGAAAGGGCTTGTTGATGCAGGGGTCAAGAAAATCCCTACCTTATTCCATCGTCAACCTGACAAATTTGAGAAGGCCTCAAATTTAGGCAACCATGTTATTCCAGTCATAGACCTTGCAAGTATTGATAAAGATCCAACTTTGCGCCAAGAAATTGTTCACAAGCTCAGGGAAGCATCTGAAACATGGGGTTTCTTTCAGGTTGTGAATCATGGGATCCCTCTTAGTGTTCTTGAGGAGATAAAAAATGGGGTGAAAAGGTTTTTTGAGCAGGATTCTGAAGTCACCAAAGGATTTTATACACGGGACAAAGTTAAATCCTTTACTTACAATAGCAACTTTGATATTTATAGCTCACCAGCACTCAATTGGAGGGATACTTTTACGTGTTACATGGCTCCTGATGCCCCCAAACCAGAAGATTTGCCTGTAGTGTGCAGAGATATACTACTGGAATATGGAAAACACGTGATGAATCTAGCAACTTTACTTTTTGAGTTGTTATCAGAAGCTTTGGGTCTGAATCCAAGCCATTTGAAAGATATGGGTTGTGCAGAGGGGCTTGTTGCTCTTGGCCACTATTATCCTGCTTGTCCTGAACCACAATTGACAGTGGGAACCACTAAGCATTCTGATGCTGACTTTCTCACAGTGCTTCTCCAAGACCATATTGGTGGCCTCCAAGTTCTTCATCAGAATGAATGGGTTAATGTGACCCCTGAATCTGGGGCTCTGGTAGTTAATGTTGGTGATTTTCTACAGATTATAACAAATGACAGATTCAAGAGTGTTGAACATCGAGTACTCGCGAACCATGTTGGTCCAAGAATATCTGTTGCATGCTTTTTCTCCACAGGTCATAGATCTTCCTCAAAGCTCTATGGACCTATAAAGGAACTATTATCAAAGGATAACCCTCCAAAATACCGGGGAATCACAGTTGCTGACTATTCAGCCTACTTTGAGGAAAAAGGAATGGATGGTACTACTGCTCTTACACACTACATGCTTTGA 1098 0.4144 MGTNATSEVANFHYMLSERKAFDETKAGVKGLVDAGVKKIPTLFHRQPDKFEKASNLGNHVIPVIDLASIDKDPTLRQEIVHKLREASETWGFFQVVNHGIPLSVLEEIKNGVKRFFEQDSEVTKGFYTRDKVKSFTYNSNFDIYSSPALNWRDTFTCYMAPDAPKPEDLPVVCRDILLEYGKHVMNLATLLFELLSEALGLNPSHLKDMGCAEGLVALGHYYPACPEPQLTVGTTKHSDADFLTVLLQDHIGGLQVLHQNEWVNVTPESGALVVNVGDFLQIITNDRFKSVEHRVLANHVGPRISVACFFSTGHRSSSKLYGPIKELLSKDNPPKYRGITVADYSAYFEEKGMDGTTALTHYML* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4561 365 Pfam 2OG-Fe(II) oxygenase superfamily 221 312 IPR044861 -
Lja3g4561 365 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 166 IPR026992 -
Lja3g4561 365 SUPERFAMILY Clavaminate synthase-like 26 350 - -
Lja3g4561 365 Gene3D - 20 348 IPR027443 -
Lja3g4561 365 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 16 363 - -
Lja3g4561 365 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 214 314 IPR005123 -
Lja3g4561 365 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE-LIKE PROTEIN 16 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4561 Lja-Chr3 87479233 87481423 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4561 18 365 Glycosyltransferase AT5G59530 59.091 6.43e-154 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4561 - - lja:Lj1g3v1930160.1 530.406