Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4556 ATGAACCTTCCCACTTTCCTTTTGCTCACTCTCGCAATACTCTTATCTTCTTTCCATTCTTTTGTTGATGCTAATAACCATCTCATTCAACAAACCTGCAGGAATTGCTCAAAAAGTGATCCCAACATAAGCTACAATTTTTGCATAACATCTTTTCAATCAGACCGTAGGAGCCACTGTGCCCAAAACCTCCACGAACTAGGCCTCATCTCTATCAAGATTACAAGGCGCAACGTGACGGATATAATATCTAAGATCAAGGAGCTTTTGAAGAAGAAGAGCTTGGACACGCTTATCAAAGAGTGCTTAGATGATTGCCTTGAAGTTTACTCTGATTCCATTACAACAATTAGAGAAGCTATTAGAGATTACAAGGCCAAGCGTTATGCGAATTCTAACGTCAAGATAAGCTCGGTTTTAGATGCATCTACAACATGCGAAGATGGATTCAGGGAAAAGAGCGATGTCGTTGCGCCATTGAGTAAGAGAAACAAGGATGTTTTTCAGCTTTCTGCTATAGCTCTTTCGATTATTAACATGCTCAATGTGGATAAATTGATGGGTCCGTTTTGA 573 0.3979 MNLPTFLLLTLAILLSSFHSFVDANNHLIQQTCRNCSKSDPNISYNFCITSFQSDRRSHCAQNLHELGLISIKITRRNVTDIISKIKELLKKKSLDTLIKECLDDCLEVYSDSITTIREAIRDYKAKRYANSNVKISSVLDASTTCEDGFREKSDVVAPLSKRNKDVFQLSAIALSIINMLNVDKLMGPF* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4556 190 SMART PMEI_2 24 177 IPR006501 GO:0004857
Lja3g4556 190 PANTHER PECTINESTERASE 6 180 - -
Lja3g4556 190 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 182 IPR035513 -
Lja3g4556 190 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 6 180 - -
Lja3g4556 190 Pfam Plant invertase/pectin methylesterase inhibitor 28 177 IPR006501 GO:0004857
Lja3g4556 190 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 181 IPR035513 -
Lja3g4556 190 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 181 IPR006501 GO:0004857
Lja3g4556 190 CDD PMEI-Pla_a_1_like 33 180 IPR034088 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4556 Lja-Chr3 87442145 87442717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4556 - - gmx:100306248 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4556 3 87442145 87442717 Lja3g4556 3 87442145 87442717 ECH