Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4545 ATGGGAACTGTTGTTGAAGCTGCAAACAAGGATGCTGCAAATGGAAATGGGAGCATCCTAAACAAAAATCTCACAGTTGTTTTTGTGTTAGGTGGGCCAGGCAGCGGAAAGGGTACTCAATGTTCGAACATTGTCAAACATTTTGGGTATACTCACCTCAGTGCTGGGGATCTTCTGCGAGCAGAAATTAAATCCGGTTCTGAAAATGGTACAATGATTCAGAATATGATTAAAGAAGGAAAAATTGTTCCATCTGAGGTAACAATTAAGCTGCTGCAGCGAGCAATGCTGGAAAATGGCAATGACAAATTTCTTATTGATGGTTTTCCTCGCAATGAGGAAAACCGTGCAGCGTTTGAGAAAGTGACAGGAATAGAGCCAACGTTTGTCCTTTTTTTTGATTGCCCTGAGGAAGAGATGGAGAGGCGACTTCTTGGCCGGAACCAGGGTAGAGAAGATGACAACATTGAAACAATAAGGAAGCGGTTTAATGTTTTCTTGGAATCTAGTCTCCCTGTGATTAATTATTATGATGCAAAGCTAAAAGTTCGCAAGATTGATGCTGCAAGGCCTGTTGAGGAGGTATTTGAGTCAGTCAAAGCTATTTTTAGTCCAAAAAATGAGAAGGCTGACTGA 636 0.4135 MGTVVEAANKDAANGNGSILNKNLTVVFVLGGPGSGKGTQCSNIVKHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQRAMLENGNDKFLIDGFPRNEENRAAFEKVTGIEPTFVLFFDCPEEEMERRLLGRNQGREDDNIETIRKRFNVFLESSLPVINYYDAKLKVRKIDAARPVEEVFESVKAIFSPKNEKAD* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4545 211 Hamap Adenylate kinase [adk]. 25 204 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g4545 211 PANTHER NUCLEOTIDE KINASE 1 208 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g4545 211 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 26 203 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Lja3g4545 211 PRINTS Adenylate kinase signature 28 41 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g4545 211 PRINTS Adenylate kinase signature 56 70 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g4545 211 PRINTS Adenylate kinase signature 104 120 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g4545 211 PRINTS Adenylate kinase signature 151 166 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g4545 211 PRINTS Adenylate kinase signature 168 182 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g4545 211 PANTHER UMP-CMP KINASE 1 208 - -
Lja3g4545 211 CDD ADK 26 195 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja3g4545 211 Hamap UMP-CMP kinase [CMPK1]. 24 206 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Lja3g4545 211 ProSitePatterns Adenylate kinase signature. 104 115 IPR033690 -
Lja3g4545 211 Pfam Adenylate kinase 29 180 - -
Lja3g4545 211 Gene3D - 12 204 IPR027417 -
Lja3g4545 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 204 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4545 Lja-Chr3 87267330 87273356 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4545 K13800 - gmx:100306603 369.777