Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4543 ATGGCGTCCAAACCTGGCATTCTTACTAACTGGCCATGGCACCCTCTCGGCAGTTTCAAGTGGGTGATTGTTACACCATGGGTTGCACATAGCATCTACTCTTTCATAGTGAAAGATTCAAGTGAGAAAGACCTTGGTTACTTCCTCATCTTCCCATACATGATGGTGCGGATGCTACATGATCAAATTTGGATCACTCTTTCTCGCTATAGAACTGCCAAAGGGAACAACAGAATCGTTGACAAGGGAATTGAGTTTGAACAAGTTGATCGAGAAAGCAATTGGGATGACCAGATCTTGTTCAATGCGATCATATTTTATATGGGTATCATGTATGTTCCAGAGGCTTCCCAGTTACCTTTGTGGAAAACCGACGGTGTGGTTATGACAGTTCTGCTTCATGCGGGACCAGTGGAGTTTCTTTATTACTGGCTACACAGAGCACTTCACCACCACTTTCTCTACTCAAGATACCATTCTCACCACCATTCTTCCATTGTTACCGAACCGATTACGTCTGTGATCCATCCATTTGCAGAACACATAGCCTACTTTTTGCTATTTGCGATTCCATTATACACAACAGTGATTACCAAAACTGCATCGATAGCATCTTTTGCTGGTTATGTGGCATACATTGATTTCATGAACAATTTGGGTCACTGTAATTTCGAGTTCATTCCAAAGGCTGTCTTCTCCATCTTTCCCTTCCTAAAGTACATTATGTATACGCCAACGTTCCACTCTCTGCATCATACTCAGTTTCGGACAAACTACTCACTCTTCATGCCCATTTATGATTACATTTATGGCACTGTGGACAAGACTACAGACACCTTATATGAAACATCTTTGAAGAGAGATGAAGCTTCACCTGATGTGGTACATCTAACACACCTCACAACCCCTGAGTCTATCTATCATCTAAGATTGGGATTTTCTTCATTAGCCTCCAAACCACAAACTTCTACATGGTACTTCTACTTAATGTGGCCAATCACTTTCTGGTCTGTTCTTGTGACTTGGTTTTATGGTCGAACATTTGTGCTTGAGAGGAACGCTTTCAAAATGCTTAATTTGCAATCATGGGTTATACCAAGATTCCATGTACAATATCTATTCGAATGGCAAAGAGAAAAATTAAACAAATTTGTACAAGAAGCTATACTTGAGGCAGAGTTGAGGAAAGTTAAGGTTTTAAGTCTAGGCCTTTCAAACCAGGGAGACTTGCTCAATAAATATGGTGAGCTTTACATGAAAAGCTATCCCCAGCTAAAGATAAAGATTGTGGATGGCAGCAGTTTAGCTGTGGCTATTGTTTTGAACAATATTCCGAAAGATGCAAGCCAAGTGCTTTTTTGTGGTAAACTTAATAAGGTTTCATATGCCATTGCGAATGCTTTGTGTGAAAGGGGCACTAAGATTACAACATTGTACAAGGATGATTATGACAATCTTCAATTGAGGCTCCCCACTGAGTTCAGAGAGAGTTTGGTTTTCCCGGAATCCTCTACTACAAAGATATGGCTAGTAGGAGATCAACTTAACGAGGCAGAGCAACAAAAGGCCCCAAAAGGATCATTGTTCATACCATTTTCCCAATTCCCTCCAAAGAAACTGCGAAAGGACTGCTTCTACCTTAGCACACCAGCCATGGTGACTCCCCCTTCATTAGTGAATGTGCACTCTTGTGAGAACTGGCTGCCAAGAAGAGTGATGAGTGCATGGCGTATAGCTGGAATACTTCATGCCTTGGAAGATTGGAATATTAATGAATGTGGGGATGTCATGTTTAGCATTGAGAAAGTATGGCAAGCAAGTCTTTACCATGGATTTAGGCCATTGAAGACTAACTTTCCCCTTGCTTGA 1869 0.412 MASKPGILTNWPWHPLGSFKWVIVTPWVAHSIYSFIVKDSSEKDLGYFLIFPYMMVRMLHDQIWITLSRYRTAKGNNRIVDKGIEFEQVDRESNWDDQILFNAIIFYMGIMYVPEASQLPLWKTDGVVMTVLLHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFLLFAIPLYTTVITKTASIASFAGYVAYIDFMNNLGHCNFEFIPKAVFSIFPFLKYIMYTPTFHSLHHTQFRTNYSLFMPIYDYIYGTVDKTTDTLYETSLKRDEASPDVVHLTHLTTPESIYHLRLGFSSLASKPQTSTWYFYLMWPITFWSVLVTWFYGRTFVLERNAFKMLNLQSWVIPRFHVQYLFEWQREKLNKFVQEAILEAELRKVKVLSLGLSNQGDLLNKYGELYMKSYPQLKIKIVDGSSLAVAIVLNNIPKDASQVLFCGKLNKVSYAIANALCERGTKITTLYKDDYDNLQLRLPTEFRESLVFPESSTTKIWLVGDQLNEAEQQKAPKGSLFIPFSQFPPKKLRKDCFYLSTPAMVTPPSLVNVHSCENWLPRRVMSAWRIAGILHALEDWNINECGDVMFSIEKVWQASLYHGFRPLKTNFPLA* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4543 622 PANTHER STEROL DESATURASE 1 617 - -
Lja3g4543 622 Pfam Fatty acid hydroxylase 136 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Lja3g4543 622 PANTHER VERY-LONG-CHAIN ALDEHYDE DECARBONYLASE CER1 1 617 - -
Lja3g4543 622 Pfam WAX2 C-terminal domain 451 614 IPR021940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4543 Lja-Chr3 87244007 87251960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4543 1 615 Lipid Metabolism Gene Families AT1G02190 56.160 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4543 K15404 - gmx:100790115 1090.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4543 3 87244007 87251960 Lja3g4543 3 87244007 87251960 ECH