Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4542 ATGGCTTCAAGGCCCGGAATCCTCACTGATTGGCCATGGAAGCCACTTGGAAGTTTTAAGTATATGATACTAGCTCCATGGGTAGTTCACAGTTCATATTCTGTGCTGGTGAAGGATAAGAGTGAAAGGGACATATCCACCTCACTCATATTCCCATTTTTGATATGGCGTATGCTTCACAACCAGATATGGATCACGTTCTCTCGTTACAGAACCGCCAAAGGAAATACCAGAATTGTGGACAAGGGAATCGAATTTGATCAAGTTGATAGAGAAAGAGACTGGGATGACCAAATATTGTTTAATGGGTTGCTGTATTACTTGGCATGTTATACCTTGCCCGGGGCGTCACGTCTTCCACTCTGGAGAACAGATGGGGTGTTAATAGCAATATTGCTTCATGCAGGCCCAGTGGAGTTTCTTTACTACTGGCTTCACAGAGCACTTCACCACCACTACCTCTACTCAAGATACCATTCTCACCACCATTCCTCCGTCGTGACAGAACCCATAACTTCTGTGATTCATCCATTCGCGGAACACATATCATATTTCCTTCTATTCGCAATAGCCTTGTTAACCCTTGTGTTCACAAGAACAAGCTCTGTGGCGGCCATGGTTGGATATGTCACCTACATTGATGTTATGAACAATATGGGTCACTGCAATTTTGAGATTGTTCCAAAATGGCTCTTTGATGTCTTTCCCCCACTCAAGTATCTCATGTACACTCCATCGTTTCACTCTTTGCACCACACTCAGTTCAGGACAAACTACTCCCTTTTCATGCCATTTTATGACTACATCTATGGCACCATGGACAAGGCTTCAGATGAGCTGCATGAGTCAGCATTGAAACGAAAGGAAGAAACCCCAGATGTTGTGCACCTAACCCACCTCACTACGCCAGAATCCATCTATCATTTAAGGCTTGGGTTTGCTTACCTTGCCTCCAAGCCTTACATGTCCAAATGGTACCTTTGGTTGATGTGGCCTGTCACAGTTTGGTCCATGGTCCTCACATGGGTCTATGGTCGCACTTTCATTGTGGAGAGGAACCGTTTTGGTAAACTCATGCTGCAAACTTGGGCAATCCCAAAGTATAGTTCCCAATTCTTTCTACAATGGCAGAAAGTTCCTATTAACAGAATGATTGAGGAAGCAATACTTGATGCTGATAGAAAAGGCATAAAAGTACTGAGCCTTGGTCTCTTGAATCAAGGGGAGGAGCTTAACATCTATGGAGGGCTATATGTTAGAAGGTATCCAAAGCTCAATGTTAAGATTGTTGATGGTAGCAGCCTTGCAGCTGCTGTTGTCCTTAATAGCATTCCTAAAGGCACAACTCAAGTATTACTAAGGGGAAAACTCACCAAGGTTGCCTATGGTATTGCCTTTACATTGTGCCAACAAGGAGTTCAGGTCGCTACAATGCATGAGGATGATTATGTAAAGCTCAAAAAGTCATTCAATAGCCCTGAAACTAATTTGGTCCTTGCTAAGAGTTACAATCAGACGATTTGGTTAGTGGGAGACGGATTGACAGAAGAGGAACAGGTGAATGCACCCAAAGGAACAATATTTATTCCATACTCCCAATTCCCACCAAAGAAATACCGCAAGGACTGCTCCTACCATTGCACTCCAGCAATGCAAATTCCTAGTTCTGTTGAAAATATCCATTCTTGTGAGGACTGGTTGCCAAGGAGGGTAATGAGTGCATGGCGCATAGCTGGGATAGTGCACTCTTTGGAAGGATGGACTGAACACGAGTGCGGCTACACAATGCATAACATAGACAAAGTTTGGAAATCAACTCTTCAACATGGGTTCAAACCTCTCACTGTGCCAGTCCAAGAAATTGCGCATTACTAG 1875 0.4373 MASRPGILTDWPWKPLGSFKYMILAPWVVHSSYSVLVKDKSERDISTSLIFPFLIWRMLHNQIWITFSRYRTAKGNTRIVDKGIEFDQVDRERDWDDQILFNGLLYYLACYTLPGASRLPLWRTDGVLIAILLHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHISYFLLFAIALLTLVFTRTSSVAAMVGYVTYIDVMNNMGHCNFEIVPKWLFDVFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYGTMDKASDELHESALKRKEETPDVVHLTHLTTPESIYHLRLGFAYLASKPYMSKWYLWLMWPVTVWSMVLTWVYGRTFIVERNRFGKLMLQTWAIPKYSSQFFLQWQKVPINRMIEEAILDADRKGIKVLSLGLLNQGEELNIYGGLYVRRYPKLNVKIVDGSSLAAAVVLNSIPKGTTQVLLRGKLTKVAYGIAFTLCQQGVQVATMHEDDYVKLKKSFNSPETNLVLAKSYNQTIWLVGDGLTEEEQVNAPKGTIFIPYSQFPPKKYRKDCSYHCTPAMQIPSSVENIHSCEDWLPRRVMSAWRIAGIVHSLEGWTEHECGYTMHNIDKVWKSTLQHGFKPLTVPVQEIAHY* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4542 624 PANTHER FATTY ACID HYDROXYLASE SUPERFAMILY PROTEIN 1 617 - -
Lja3g4542 624 Pfam WAX2 C-terminal domain 451 613 IPR021940 -
Lja3g4542 624 PANTHER STEROL DESATURASE 1 617 - -
Lja3g4542 624 Pfam Fatty acid hydroxylase 137 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4542 Lja-Chr3 87222516 87235771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4542 1 614 Lipid Metabolism Gene Families AT1G02190 58.814 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4542 K15404 - gmx:100818020 1091.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4542 3 87222516 87235771 Lja3g4542 3 87222516 87235771 ECH