Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4539 ATGTCGATCAAGCAAAGACTTCCAAACCTGATACGCACTCTCCGCAATGAACAACCTCTCAAGCCTCAACAAAACCATGCCTTACCTTCTCTCCGTCGCGCTTTCTCTCTCTACGATCAGATCAACGTCATTGACAAACTCCCCGATGACCAGCTTCGCTTTCAAGGGTATAGTGATACGGGGTTTACTGTAAATAGAGTTGAATATGAAGGAAGCTTGCTTTGTGTTGGAAATTTGCTCTTGTCTTGGAAACCCAACAAGTTTTCAGAAATCACTGCTGATAGCTTGTCACTCTTCCAAATTGTTCGCCCTATTCCAGAGATACTGATTCTTGGCTGTGGAAGGAACATTCAGCCTGTAGATCCTGAACTTAGAAAGTTTATTCGGTCTACCGGCATGAAGTTAGAAGCTGTTGACTCGAGAAATGCTGCATCAACTTACAACATACTGAATGAAGAAGGTCGTATTGTGGCTGCTGCGCTTCTTCCGCATGGTGTTTCTTCATGA 507 0.4398 MSIKQRLPNLIRTLRNEQPLKPQQNHALPSLRRAFSLYDQINVIDKLPDDQLRFQGYSDTGFTVNRVEYEGSLLCVGNLLLSWKPNKFSEITADSLSLFQIVRPIPEILILGCGRNIQPVDPELRKFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPHGVSS* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4539 168 SUPERFAMILY MTH938-like 42 164 IPR036748 -
Lja3g4539 168 Gene3D - 38 164 IPR036748 -
Lja3g4539 168 PANTHER NUCLEAR PROTEIN E3-3 6 168 IPR007523 -
Lja3g4539 168 PANTHER BNAC04G03830D PROTEIN 6 168 - -
Lja3g4539 168 Pfam Protein of unknown function (DUF498/DUF598) 55 162 IPR007523 -
Lja3g4539 168 CDD Mth938_2P1-like 52 165 IPR034095 GO:0032981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4539 K09008 - gmx:100816956 279.256