Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4538 ATGTCACTGCTCCGACCGCTAATGTTACGACGAGTGTCACCCTTTCTTATCATTCCCTCTCTCACTCCCACTCCTTCTCTTCCATTCTGTTCCAACTGCAACCTTCATTCTTCTACTTCTCCTCAAGTTGCAGTCCAAGACCAACAACAACAACAACAACGAGAGCCTCATCTGCATAGCACACAACTCGTTGCAGCGGAATATGCTGACCTCAATCTCTCTTACGACCTGGATCTGGGTCATGTCAGGATCAGGCAACATGTCAATCCTCTTAGCTCTTCTTTCTCTGTTCCTGCACAAGTACCAGACTGGAACCAGGTCTTTGCTGACCCATCTTTGCCACTGATGGTGGATATTGGATGCGGCAGTGGCAGGTTTCTCATGTGGCTTGCTAAAAGAACTCCTAAAGAGAGAAATTATTTGGGATTGGAAATACGGCAAAGGCTAGTCAAACGTGCTGAGATATGGGTAAAAGATCTGGCTCTTGATAACATACATTTCTTGTTCGCAAATGCTACAATTTCATTCAAGCAGTTGGTAGAATCATATCCTGGGCCGCTGCTGTTAGTTTCTATTTTGTGTCCAGACCCACATTTCAAGAAAAAACATCATAAAAGAAGAGTTCTGCAGAAATCTTTGGTTGGTTCTATTGTAGATAATTTAATGCCTGGGGGACAGGTGTTCGTACAGTCTGATGTGCTTGAAGTGGCCCTTGACATGAGAAATCAATTTGATGAAGTTGATGCACTGAAGCACATTGATGATTCGAACCCGGCTATGTTGTGTGACTCCGAAGGATGGTTGTTAAGCAACCCCATGGAGATAAGGACTGAGAGAGAGATACATGCAGAGTTTGAAGGTGCAAAAATCTACCGAAGGTTGTACCAGAGATGGGTGTGA 900 0.4433 MSLLRPLMLRRVSPFLIIPSLTPTPSLPFCSNCNLHSSTSPQVAVQDQQQQQQREPHLHSTQLVAAEYADLNLSYDLDLGHVRIRQHVNPLSSSFSVPAQVPDWNQVFADPSLPLMVDIGCGSGRFLMWLAKRTPKERNYLGLEIRQRLVKRAEIWVKDLALDNIHFLFANATISFKQLVESYPGPLLLVSILCPDPHFKKKHHKRRVLQKSLVGSIVDNLMPGGQVFVQSDVLEVALDMRNQFDEVDALKHIDDSNPAMLCDSEGWLLSNPMEIRTEREIHAEFEGAKIYRRLYQRWV* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4538 299 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 290 IPR029063 -
Lja3g4538 299 CDD AdoMet_MTases 117 230 - -
Lja3g4538 299 PANTHER TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE 40 297 - -
Lja3g4538 299 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 40 297 IPR003358 GO:0006400|GO:0008176
Lja3g4538 299 TIGRFAM TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 100 292 IPR003358 GO:0006400|GO:0008176
Lja3g4538 299 Pfam Putative methyltransferase 114 291 IPR003358 GO:0006400|GO:0008176
Lja3g4538 299 Gene3D Vaccinia Virus protein VP39 84 298 IPR029063 -
Lja3g4538 299 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 72 297 IPR003358 GO:0006400|GO:0008176
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4538 Lja-Chr3 87158809 87163598 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4538 K03439 - gmx:100788255 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4538 3 87158809 87163598 Lja3g4538 3 87158809 87163598 ECH