Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4535 ATGGATCCTCAGGCCTTCATTAGGCTGTCAATAGGCTCTCTGGGGTTGAGATGTACTGGAATCGAACTGAGCACTGGAAAATCTGGAGTTCACAGATTCTCTTCATCTTATGTTTGTGAGATACGACTTCGAGGTTTTCCTGTTCAAACATCATCTGTCCCCTTGATAACCTCTTCTGAAGTTATACCTGATACTCAGAACATTGCTTCAAGCTTTTACCTTGAAGAATCTGATTTAAAAGCATTGCTTGCTCCTGGTTGTTTCTACAATTCAAATGCTTGTCTGGAGATTGCTGTATTTTCCGGGAGGAAGGGATCCAGTTGTGGAGTCAGCATCAAAAGGCAGCAAATTGGGATTTTCAAAATGCAGGTCGGCCCTGAGTGGGGTCAGGGAAAGCCATTGATTCTTTTTAATGGGTGGATAGGTATTGGCAAGAACAAACAGGAGAACGGAAAACTGGGTGCAGAGCTACATTTAAAAGTAAAACTAGATCCTGACCCTAGATTTGTATTCCAGTTTGAAGATGTAACGACATTGAGTCCTCAAATAGTTCAACTGCAAGGATCTATCAAGCAGCCAATCTTCAGTTGCAAGTTTAGTAAAGACAGGGTTTCCCATATTGACCCGTTGAGCACATACTGGTCAGATTCTATGGACATTTCTGACTTCGAGACTGAGAGGAGAGAGAGAAAGGGGTGGAAGGTGAAGATCCATGACCTATCTGGCTCAGCTGTAGCTGCAGCCTTCATAACAACTCCCTTTGTTCCATCTTCAGGTTGTGATTGGGTTGCCAGATCCAACCCAGGAGCTTGGTTGATTGTTCGTCCCGATGTCGGTAGATCCGAGAGCTGGCAGCCTTGGGGAAAGCTTGAAGCATGGCGTGAGCGTGGCCTCAGAGACTCCGTGTGCTGCAGATTCCATCTTTTATCTGAAGCTCAGGAAGGAGGTGAACTCCTCATGTCTGAAATACACATAAATGCTGAAAAGGGTGGAGAGTTTTTCATAGACACTGAAAAGCACATGCGAAATGCCGCAGCAAGTCCAGTACCAAGTCCACAAAGTAGTGGAGACTTTGGTGCACTGAGTCCAGTAGTTGGAGGTTTTGTCATGTGCTGCAGAGTTCAAGGCGAGGGGAAGCGGGGCAAGCCATTGGTACAACTGGCATTGCGACATGTGACGTGTGTGGAGGATGCTGCCATCTTCATGGCGCTTGCAGCTGCTGTTGATCTCAGTATCGAGGCTTGTAGACCTTTTCGTAGGAAGATCAGAAGAGGTAAACAACATTCTATGTGA 1293 0.4594 MDPQAFIRLSIGSLGLRCTGIELSTGKSGVHRFSSSYVCEIRLRGFPVQTSSVPLITSSEVIPDTQNIASSFYLEESDLKALLAPGCFYNSNACLEIAVFSGRKGSSCGVSIKRQQIGIFKMQVGPEWGQGKPLILFNGWIGIGKNKQENGKLGAELHLKVKLDPDPRFVFQFEDVTTLSPQIVQLQGSIKQPIFSCKFSKDRVSHIDPLSTYWSDSMDISDFETERRERKGWKVKIHDLSGSAVAAAFITTPFVPSSGCDWVARSNPGAWLIVRPDVGRSESWQPWGKLEAWRERGLRDSVCCRFHLLSEAQEGGELLMSEIHINAEKGGEFFIDTEKHMRNAAASPVPSPQSSGDFGALSPVVGGFVMCCRVQGEGKRGKPLVQLALRHVTCVEDAAIFMALAAAVDLSIEACRPFRRKIRRGKQHSM* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4535 430 Pfam Protein of unknown function (DUF1005) 1 424 IPR010410 -
Lja3g4535 430 PANTHER - 1 429 - -
Lja3g4535 430 PANTHER OS08G0163500 PROTEIN 1 429 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4535 Lja-Chr3 87138868 87143422 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4535 - - gmx:100815012 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4535 3 87138868 87143422 Lja3g4535 3 87138868 87143422 ECH