Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4534 ATGGATACTATAAAAATGGAGGTGGAGTTGGAGCCTCGCGTGAAGGCTCTTCCGTTCAAGGTCAAAGCCATGTCCAGGGAATCGCCGTCGCAGAAAGCCCTCCATGTCCTCGACACCGACCTCCGTTCTCACTGGTCCACCGCCACCAACACCAAGGAATGGATACTCCTCGAACTCAACGAGCCGTGTCTATTGTCGCATATTCGGATTCATAACAAGTCTGTGCTTGAGTGGGAGATTGCAGTTGGTTTACGGTACAAGCCAGAGACATTCCAAAAAGTTCGCCCACGTTGTGAAGCGCCTAGACGTGATATGATCTACCCTATAAATTACACTCCATGTAGATATGTGAGGATATCTTGTTTGCGTGGAAACCCTATTGCTATATTCTTTGTTCAGCTAATTGGAGTTTCTGTGGCTGGTCTTGAACCTGAATTTCAACCGGTTGTTAATTACTTGCTGCCACATATTCTATCTCACAAACAAGATTCTAATGATATGCATCTTCAGTTACTGCAAGACATGACAAACCGGTTGCATGTATTTCTTCCACAACTAGAGACAGACCTTGCCAGCTTTCCAGATAATCCTGAATCTAATCTGCGATTTCTTGCCATGCTTGCTGGTCCTTTTTATCCTATTCTTCATGTGGTGAATGAAAGAACATCTTCAAGGACTCCAGGCAATACAACTGACCTTGATGTCTCCAAAAGTAGTCAACTCTCACCGGCTCTAACTGTTTCCTCTAACTTTGAGCCCAGGAGATCACGGAGTTCGTCCCCTTTCATTTCGTCTGCATATCGTGCCATAGTTTTTCGGCCAGATGCAATTTTTGTGCTGCTGAGAAAGGCATATAAAGATTCTGATCTGGGCTCTGTTTGTAGGATGGCATCTACAATTATGCAGAAGCTCATAAATCCTGATACTGAGCAAGATGTATCAAACCCTCAGAATGAATTTATTTTTCTTTCGGAAGACAAATCAAAGTCAGAACTGTCTAGTCCTTTATCTTTAGTTGATTATTCAAACCTGTTTGGTGAGGATTTCCGAATCCCAGATGAGCAATGGGATTGCAGTTATCTTAATATAGTAGATACTGGGGCAGTGGAAGAAGGGATCTTACATGTTGTTTATTCTTGTGCATCCCAGCCTGTTCATTGCAGCAGGATGGCTGAGAGAACTTCAGACTTTTGGGCTGCACTGCCTCTTGTACAAGCTCTACTGCCAGCTCTACGCCCATGGGTGAGCAATTCTTTTGATGTTGTGGATGAAACTTTTTCTCAGTGGAATCAGCCTATTGTACAACAAGCCTTCTCCCAGATTGTTACTACAGCAGCATCAGCTACCTATCGCTCACTTCTTTATTCTTGTGCTGGTTATCTGTCTTCATATTCTCCATCTCATGCTAGGGCTGCTTGTGTGCTGATTGATCTGTGCTCTGGTGTTCTAGCACCTTGGATTACTCAGGTGATAGCAAAGGTTGATCTTGCTCTGGAGCTTGTGGAGGATCTTTTGGGCCTAATCCAGGATGCTCACAATTCACTTGTTCGTGCTCGTGCTGCCTTGAAGTATATTGTGCTAGCTCTATCCGGGCATATGGATGACATATTAGGGAAATATAAGGAAGTTAAACACAGAATCCTCTTTCTTGTGGAGATGCTTGAGCCTTTTCTTGATCCTGCCATTGCTGTATCGAAAAGCAAAATAGCTTTTGGTGATCTATCTTCTTCGTTTCCAGAAAAGCAGGAGCAGAATTGCGTGATTGCTCTTAATATCATCCGTACTGCAGTGCGAAAGCCAGCTGTGCTACCCTCTCTGGAATCAGAATGGCGACATGGATCTGTGGCTCCTAGTGTGCTTCTCTCTATATTGGAACCACACATGTTAATGCCGCCAGATGTTGACCTTTGCAAGTCTGTTTCAAGACTAACTGAACATGAAACTGCATCTGTTTTGCCTCTTTACTCTGACACCAATGCTGGAGGTGCCATTTCCAAGTCTAATAGTCAAGATGATCCTGATGGAAAAGCAGATGTATCAGAAACACTAGGAAGATCTGATTCTATTGATGATCGTAATCTACTTTTTGCCCCATCTGAATTGCAGAATATTACATTGACAAACTATTCTAATGCACCTAACCAAAATAGCTCTGTTTCTAACATTAGGGATATGAAATTGGAATCCAAACGTGTTGTTGATGAAAATTCCAGCCATCATTTTCCTACTAATGTTGTCATAGATTCTGGCCTTGGTTTTGAATACTTCCACCTGCAGGCAGATTATTTTCAACTTCTAAACCACCATGATTGTGAGCTTCGTGCTTCTGAGTTTAAACGCTTGGCTTTAGATTTGCATTCTCAGAGTAACATCACTATTGAAAGCCATGATGCTGCGATTGATGCTTTACTGTTGGCAGCAGAATGCCATGTAAATCCATATTTTATGTCATCTATAGGAACCACTTCAAAACTTTCAGACCTTTTGAACATCAATGAATGTAAATTCGGGCAGACTCATGATAATCTGGAGCTGAACACGGCTTCTGGAAGGAATATACATAATTTACAGACAATAGCCCATATAGAAAGACAGAGAGATAAACTTGTTTTTCACATACTTCTTGAGGCTGCAGAATTGGATAGGAAATATCATTTAACAGTATCTGATGGAGAAGATGGCCCTTATTCCGCTGCAGGTTTTGATGAACAGGTTATCAAGCTGTCCCCCCTTGATGTACAATATGCAGATGCTCTTACCTTGGTTCGACAAAACCAAGCTCTACTGTGTAAATTTTTGATCCATCGGTTGCAAAGAGACCAAATCTCAATGCATGAAATTCTCCTGCAATGTCTTGTGTATTTTTTGCATACGGGCACCAAATTATTTTGCCCTCCAGAACATGTGATTGATATCATTTTAAAATATGCTGAAGACTTGAACAGGATGCTGGCATCTTTTCATCCTCAGCTGAAGGTTGGTAGTTTGCATTTGGCACAAGAAAGAGCACGTGGGATAGAGCGGCGTTGGTTACTGTTACAAAGATTGGTAATGGCCTCAAGCAGTGGAGGTGAAGAGGAAAAATTTGGAACTCATATCCAAAATAATTACCTCTCTGGAAATTTAATTCCCTCTTCAGCATGGATGCATAGAATTTCTCATTTTTCTGGTTCTGTGTACCCTTTGGTTCGATTTCTTGGTTGGATGGCAGTATCTCGTAATGCAAAACAGTATATGAAGGACCGGATTTTCCTTGCATCTGATCTGTCTCAGCTGACATATTTACTTTCTATTTTTGCTGATGATCTTGCTGTTGTTGATAATGTTGTCAATAAAAAGTATGAAGAGGTTAAAATTGAAGATTCACGGGTTGAACTTGGTTCCTCTGTTAGAAGAGAAGTTGAACGAAGTAACCAATATAATGAGGAACAATCTTTTTCTGCAATCTACCCTGAACTCTGGAGATTCTTTCCTAATATGAAAAGGCAATTTGAATCTTTTGGAGAAGCCATTTTAGAGGCAGTTGGTTTGCAGCTGAGATCTGTTTCTTCTACTCTTGTGCCTGATGTTTTGTGTTGGTTTTCTGAGTTGTGTTCATGGCCATTTTCCGTTGCTTCTTCAATCAGTAATGACAATTTGAAAGGTTATAATGCAAAGAATGCTAGAGCAATAATTCTTTATGTGCTTGAAGCTATTATTGTTGAGCACATGGAAGCTATGGTTCCTGAGACACCTAAATTGGTGCAAGTGCTTGTGTCACTTTCAAGTTCTACTTACTGTGATGTATCATTTCTCGACTCTGCATTGCGTTTGTTAAAGCCTATTATTTCTTGTTCTTTGTCCAAGGTCTCTCATGATGAAAAGTTATTGGATGGTGATTCCTGTTTTAACTTTGAGGAATTATGCTTTAATGTTCTTTTCAGTAGAATTAAACAGAAGAATGAGATCAAACCTAGTTCTGAAGATAAAGGATACAATGTGGCACTGGCTATTTTTATTTTGGCTTCAATTTTTCCTGACTTATCTGTTCGATATAGAAGGGAATTTCTGCAGTCTCTATTAAATTTTGCAAACTTTGCTGCTTTTGAGCCGACAACTTCTTTCCATGATTATCTCAGTGCATTTCAGTGTGTTATGGATAACTGCAAATTACTGCTAGTGAATGCATTAACAGCATTTGGTGTTATTCCTATTCAGCTGCCGCCTTTTCCTCATGTGACTGATGGTCGGCTTTCTGATGATAACTTACCAAATCCTTGGTTTCTCAGTGATATCTGTCACACTTCTCGTGAGAATGATGTTCTTAACGTAGAAAGTAACTGTTCTGTTGCTGATGTTGATCATTGTCATTTATCTTCTGATGATTTAGAAGGCTTATCTAAAGACATGGTGGATCTCATTTCTGAGCTTAATCCAGCTATTGAGCGCTGTTGGAATCTTCATCATCAGATTACCAGAAAGTTGACGATAACGGCATCAGAGTGTTTTGTCTTCTCAAAATGTTTGACATCAGTTTCTAAAAAATTTAAGAATGTTGAAGATGGTGATGATAGAAATTCTTCACTGGCTGAATCATCTGACCTGTTCACATTTCATTGGAGAGTTGGTCTTGAAGGTCTCTCTGAATTGATCATTACCCTTCAAGAATGCAGTTGCTGGGAAGTTTCTAGTTTGATTCTTGATTGTCTGCTTGGAGTACCCTGTAGCTTCTGCCTGGATAATGTGGTAGGCTTGATATGTTCTGCAATAAAGAAAGTTTCTTTCAGTGCACCTAAAATCTCTTGGCGTTTGCAGAGCGATAAGTGGCTGTCTTCATTAATCGCCAGAGGTATCTACAACATTCGAGAAAGTGAGGTTCCTCTCACTGATCTGTTTTGTACATTGCTGGGCCATGCAGAACCTGAACAACGTATGATAGCAATAAAACATTTGGGAAAACTTGTTGGCCAATGTACAAATGGAGAAAGTGCAGTGTTAAATTCAAAAATTTGCACTGACTTTGTTCTGAATAAGTTAGCTCTACATGTTCCTGATCATGTCTTATCTCATTTGGTTTCAAGTACTTGGGATGAGATTGTTGTGCTGGCATCATCTGATACATCATTTCAAATAAGGGTTTATGCAATGGCACTTCTTTCAAATTACATTCCATTTGCTGAGCGCCATCACTTGCAATCTCTTCTTGTGGCAGCTGATAGGATTTGTTGTTTCCACTATGCACAACCATCACATGAGGGTTCTATCCTACAACTTTCATTAGCACTTATTGCTTATGCATGCCTGTACTCATCACCTGAAGATATTTCTTTGATTCCCGAAAATGTATGGGGAAATGTTGAAACATTAGGGTCATCAAAACATGATGGCAAGCTTGGAGACCTTGAAAAGAAGACTTGTCAAGTCCTCTGTAGATTGAGGGATGGAGATGAGGCGAAAGAGGCACTGAAAGAAGTACTTTCTTCAAATTCTTCAAAGCAGCATGATCCAGACTTTGCTAGTATGCGTGAATCTATTCTCCAGGTCCTTGGCGACTTAACAGCAGTTCACTCATATTTTGATGTATTCTCAGAGAAAATTAACCAAGAAGCTATGGAGGTAGAGGAGGCTGAGATGGAACTAGACATTATACAAAAGGAACATGCATTACCAGGACGAATGGAGGATTCCAAAGGTTGGAATCAGACACCAACTCTACCCTCCTATGGGAAGGATCTTTCAAGGCTTCAACAAATCAGAGAGTGCATTCGTTCCCTGGAGAAGACCAAACTTAAAGAAGATATTCTAGGCCGTAGGCAAAAGAAAATACTACTGAGACACACCCATCAAAAACATTTGGAAGAAGCAGCTTTACGGGAAGCAGAACTTGTACAAGAACTTGATAGGGAGAGAGTGGCTGAAATTGAAAAGGAGCTGGAAAGACAAAGATTACTAGAATTAGAGCGTGCTAAAACAAGGGAATTGCGTCACAATCTTGATATGGAGAAGGAGAGACAAACGCAGAAAGAACTTCAGCGTGAAATAGAGCAAGCAGAATCAGGACTCCGACCATCTCGGCGTGATTTTCCTTCCTCCACCCACACTAATCGTCCTAGGGATAGATTTCGTGACAGAGAAAATGGGAGATCCGTAAATGATGGGAGCGCTAGAGCTGGTACTGGAAGCTTACAGCCTGAAATTCCTTCAATTAGTTCATCAACTACAGCATCACCGACTATAGTTCTTTCTGGCTCCCGGACATTTTCAGGCCAGGTGCCTACCATCTTACAGTCACGCGACCGACAGGACGACAGTGGCAGCATGTATGAAGAAAATGTTGATGGAAGCAAGGATTCAGGTGATGCCAGCAGCATTGGAGATCCAGAATTGGCATCAGCATTTGATGGCCAGTCTAGTGGATATGGATCCCAAAGGCAGAGTTCAAGGGGAAGCAAGTCAAGGCAACTCGGGGAACGCAGAGACAGAGACAGAGACATCAGGCGCGAAGGGAAGTGGGAAAGGAAGCATTGA 6507 0.4111 MDTIKMEVELEPRVKALPFKVKAMSRESPSQKALHVLDTDLRSHWSTATNTKEWILLELNEPCLLSHIRIHNKSVLEWEIAVGLRYKPETFQKVRPRCEAPRRDMIYPINYTPCRYVRISCLRGNPIAIFFVQLIGVSVAGLEPEFQPVVNYLLPHILSHKQDSNDMHLQLLQDMTNRLHVFLPQLETDLASFPDNPESNLRFLAMLAGPFYPILHVVNERTSSRTPGNTTDLDVSKSSQLSPALTVSSNFEPRRSRSSSPFISSAYRAIVFRPDAIFVLLRKAYKDSDLGSVCRMASTIMQKLINPDTEQDVSNPQNEFIFLSEDKSKSELSSPLSLVDYSNLFGEDFRIPDEQWDCSYLNIVDTGAVEEGILHVVYSCASQPVHCSRMAERTSDFWAALPLVQALLPALRPWVSNSFDVVDETFSQWNQPIVQQAFSQIVTTAASATYRSLLYSCAGYLSSYSPSHARAACVLIDLCSGVLAPWITQVIAKVDLALELVEDLLGLIQDAHNSLVRARAALKYIVLALSGHMDDILGKYKEVKHRILFLVEMLEPFLDPAIAVSKSKIAFGDLSSSFPEKQEQNCVIALNIIRTAVRKPAVLPSLESEWRHGSVAPSVLLSILEPHMLMPPDVDLCKSVSRLTEHETASVLPLYSDTNAGGAISKSNSQDDPDGKADVSETLGRSDSIDDRNLLFAPSELQNITLTNYSNAPNQNSSVSNIRDMKLESKRVVDENSSHHFPTNVVIDSGLGFEYFHLQADYFQLLNHHDCELRASEFKRLALDLHSQSNITIESHDAAIDALLLAAECHVNPYFMSSIGTTSKLSDLLNINECKFGQTHDNLELNTASGRNIHNLQTIAHIERQRDKLVFHILLEAAELDRKYHLTVSDGEDGPYSAAGFDEQVIKLSPLDVQYADALTLVRQNQALLCKFLIHRLQRDQISMHEILLQCLVYFLHTGTKLFCPPEHVIDIILKYAEDLNRMLASFHPQLKVGSLHLAQERARGIERRWLLLQRLVMASSSGGEEEKFGTHIQNNYLSGNLIPSSAWMHRISHFSGSVYPLVRFLGWMAVSRNAKQYMKDRIFLASDLSQLTYLLSIFADDLAVVDNVVNKKYEEVKIEDSRVELGSSVRREVERSNQYNEEQSFSAIYPELWRFFPNMKRQFESFGEAILEAVGLQLRSVSSTLVPDVLCWFSELCSWPFSVASSISNDNLKGYNAKNARAIILYVLEAIIVEHMEAMVPETPKLVQVLVSLSSSTYCDVSFLDSALRLLKPIISCSLSKVSHDEKLLDGDSCFNFEELCFNVLFSRIKQKNEIKPSSEDKGYNVALAIFILASIFPDLSVRYRREFLQSLLNFANFAAFEPTTSFHDYLSAFQCVMDNCKLLLVNALTAFGVIPIQLPPFPHVTDGRLSDDNLPNPWFLSDICHTSRENDVLNVESNCSVADVDHCHLSSDDLEGLSKDMVDLISELNPAIERCWNLHHQITRKLTITASECFVFSKCLTSVSKKFKNVEDGDDRNSSLAESSDLFTFHWRVGLEGLSELIITLQECSCWEVSSLILDCLLGVPCSFCLDNVVGLICSAIKKVSFSAPKISWRLQSDKWLSSLIARGIYNIRESEVPLTDLFCTLLGHAEPEQRMIAIKHLGKLVGQCTNGESAVLNSKICTDFVLNKLALHVPDHVLSHLVSSTWDEIVVLASSDTSFQIRVYAMALLSNYIPFAERHHLQSLLVAADRICCFHYAQPSHEGSILQLSLALIAYACLYSSPEDISLIPENVWGNVETLGSSKHDGKLGDLEKKTCQVLCRLRDGDEAKEALKEVLSSNSSKQHDPDFASMRESILQVLGDLTAVHSYFDVFSEKINQEAMEVEEAEMELDIIQKEHALPGRMEDSKGWNQTPTLPSYGKDLSRLQQIRECIRSLEKTKLKEDILGRRQKKILLRHTHQKHLEEAALREAELVQELDRERVAEIEKELERQRLLELERAKTRELRHNLDMEKERQTQKELQREIEQAESGLRPSRRDFPSSTHTNRPRDRFRDRENGRSVNDGSARAGTGSLQPEIPSISSSTTASPTIVLSGSRTFSGQVPTILQSRDRQDDSGSMYEENVDGSKDSGDASSIGDPELASAFDGQSSGYGSQRQSSRGSKSRQLGERRDRDRDIRREGKWERKH* 2169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4534 2168 MobiDBLite consensus disorder prediction 2083 2168 - -
Lja3g4534 2168 Coils Coil 1859 1879 - -
Lja3g4534 2168 MobiDBLite consensus disorder prediction 222 241 - -
Lja3g4534 2168 MobiDBLite consensus disorder prediction 2144 2168 - -
Lja3g4534 2168 MobiDBLite consensus disorder prediction 662 684 - -
Lja3g4534 2168 MobiDBLite consensus disorder prediction 2045 2069 - -
Lja3g4534 2168 SUPERFAMILY ARM repeat 1185 1857 IPR016024 -
Lja3g4534 2168 Coils Coil 1993 2013 - -
Lja3g4534 2168 MobiDBLite consensus disorder prediction 1989 2069 - -
Lja3g4534 2168 Gene3D - 12 143 - -
Lja3g4534 2168 MobiDBLite consensus disorder prediction 1989 2015 - -
Lja3g4534 2168 SUPERFAMILY Galactose-binding domain-like 18 139 IPR008979 -
Lja3g4534 2168 PANTHER GALACTOSE-BINDING DOMAIN-LIKE, ARMADILLO-TYPE FOLD PROTEIN-RELATED 6 2168 - -
Lja3g4534 2168 Coils Coil 1950 1970 - -
Lja3g4534 2168 MobiDBLite consensus disorder prediction 2022 2043 - -
Lja3g4534 2168 MobiDBLite consensus disorder prediction 2128 2143 - -
Lja3g4534 2168 MobiDBLite consensus disorder prediction 2095 2109 - -
Lja3g4534 2168 SUPERFAMILY ARM repeat 132 1358 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4534 - - lja:Lj2g3v1057000.1 3528.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4534 3 87095751 87125522 Lja3g4534 3 87095751 87125522 ECH