Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4530 ATGGCACAAGTGAGGAACAAGCAAGTGGTTCTAAGAGACTATGTCTCTGGTTTTCCTAAAGAATCCGACATGGAAATTGTTGAGAGCACCATAACTCTCAAGCTTCCAGAAGGCTCCAATGAGGTGCTGCTCAAAAATCTCTACTTGTCCTGTGACCCATACATGAGGAATCTCATGAGCTACATTGAAGGCACCAAGGACGAGGGATTTCCTTCCTATACCCCTGGTTCTCCATTAACAGGATTTGGTGTATCTAAAGTTCTGGAATCTGGACACACAAATTATGAGAAAGGTGATTTAGTATGGGGGTTTACTAAATGGGAAGAGTATAGCTTGGTCGCCTCAACTTCAATACTTTTCAAGATAGAGCACACTGATGTCCCCCTTTCATACTATACTGGAATTCTTGGTATGCCAGGAATGACCGCGTATGCTGGTTTCTTTGAAGTAGCCTCTCCTAAAAAAGGAGAGAATGTTTTTGTTTCAGCTGCCTCGGGCGCAGTTGGTCAACTAGTTGGGCAATTTGCTAAACTGACAGGTTGTTATGTTGTTGGAAGTGCTGGAAGCAAAGAGAAGGTGGATCTATTGAAGAATAAACTAGGATTTGATGAAGCTTTTAACTACAAAGAAGAGCCAGACCTCAATGCAACTTTGAAAAGGTACTTTCCAGAAGGAATTGACATTTACTTTGAGAATGTTGGGGGCAAGACACTTGATGCTGTACTCCTAAATATGAGAGTCCATGGCCGCATACCTGTCTGCGGAATGATCTCACAGTATAATCTTACTCAACCTGAAGGTGTAACAACTCTAGCTAATCTCATATACAAGCGGATTCGTATGGAAGGTTTTGCTGTATTTGATTTCTATCACCTTTATCCCAAATTCTTGGAGTTTATCCTGCCTCATATCAGAGAAGGGAAGATTGTGTATGTGGAAGACATTGCTGAGGGCTTGGAGAATGGCCCTGCAGCCTTGGTTGGCCTCTATAGTGGTCGCAATGTTGGTAAACAAGTGCTTGTTGTTGCTCACAAGATGGCACAAGTGAGGAACAAGCAAGTGGTTCTGAGCAACTATGTCTCTGGTTTTCCTAAGGAATCCGACATGGAAATTGTTGACAGCACCATCACTTTGAAACTTCCTGAAGGTTCCAATGGGGTGCTTCTAAAAAATCTCTACCTGTCATGTGATCCATACATGCGAACCCTCATGAACGAGGATAGTACTTTAGGGCTTGGTCGCCTCACCCTTGGCTCTCCAATGATGGGATATGGTGTGGCTCGAGTTGTGGAATCTGGAAATCCTGATTATAAGAAAGGTGATTTAGTATGGGGTATTACTAAATGGGAAGAGTATAGCTTGGTCTCCGCACCTCAGTTTTTCAAGATCCAGCACACTGATGTCCCACTTTCTTACTATACTGGAATTCTAGGTATGCCAGGAATGACTGCCTATACTGGTTTCTTTGAAGTAGGCTCTGCCAAGAAAGGAGAGAATGTTTTTGTTTCAGCTGCATCTGGTGCAGTTGGTCAACTAGTCGGGCAATTTGCTAAATTAAATGGTTGTTATGTTGTCGGAAGTGCTGGAAGTAAAGAGAAGGTGGAGCTGTTGAAGGAAAAATTTGGATATGATGAAGGTTTTAACTACAAAGAAGAGCCAGACCTCGATGCAGCTTTGAAAAGGTACTTTCCAGAAGGCATTGACATTTACTTTGAGAATGTTGGGGGCAAGACACTTGATGCTGTACTCCCGAATATGAAACTCCACGGCCGCATACCTGTCTGCGGAATGATCTCCCAGTATAATCTCACTCAACATGAAGGAGTAGCAAATTTGGCAAATCTCATATTCAAGAGGGTTCGCATGGAAGGTTTTGTTGTATCTGATTTCTATCACCTTTATCCTAAATTCTTGGAGTTTGTTCTGCCCCATATCAGAGAAGGGAAGGTTGTTTATGTGGAAGACATAGCTGAGGGCCTGGAGAATGGCCCTGCTGCCTTGGTTGGCCTCTTTAGCGGTCGCAATGTTGGTAAACAAGTGCTTGTTGTTGCTCGTGATTGA 2061 0.4318 MAQVRNKQVVLRDYVSGFPKESDMEIVESTITLKLPEGSNEVLLKNLYLSCDPYMRNLMSYIEGTKDEGFPSYTPGSPLTGFGVSKVLESGHTNYEKGDLVWGFTKWEEYSLVASTSILFKIEHTDVPLSYYTGILGMPGMTAYAGFFEVASPKKGENVFVSAASGAVGQLVGQFAKLTGCYVVGSAGSKEKVDLLKNKLGFDEAFNYKEEPDLNATLKRYFPEGIDIYFENVGGKTLDAVLLNMRVHGRIPVCGMISQYNLTQPEGVTTLANLIYKRIRMEGFAVFDFYHLYPKFLEFILPHIREGKIVYVEDIAEGLENGPAALVGLYSGRNVGKQVLVVAHKMAQVRNKQVVLSNYVSGFPKESDMEIVDSTITLKLPEGSNGVLLKNLYLSCDPYMRTLMNEDSTLGLGRLTLGSPMMGYGVARVVESGNPDYKKGDLVWGITKWEEYSLVSAPQFFKIQHTDVPLSYYTGILGMPGMTAYTGFFEVGSAKKGENVFVSAASGAVGQLVGQFAKLNGCYVVGSAGSKEKVELLKEKFGYDEGFNYKEEPDLDAALKRYFPEGIDIYFENVGGKTLDAVLPNMKLHGRIPVCGMISQYNLTQHEGVANLANLIFKRVRMEGFVVSDFYHLYPKFLEFVLPHIREGKVVYVEDIAEGLENGPAALVGLFSGRNVGKQVLVVARD* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4530 686 Gene3D - 8 340 - -
Lja3g4530 686 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 475 646 IPR036291 -
Lja3g4530 686 SMART PKS_ER_names_mod 387 681 IPR020843 GO:0016491
Lja3g4530 686 Pfam Zinc-binding dehydrogenase 167 300 IPR013149 -
Lja3g4530 686 Pfam Zinc-binding dehydrogenase 508 641 IPR013149 -
Lja3g4530 686 Gene3D - 476 652 - -
Lja3g4530 686 Gene3D - 135 311 - -
Lja3g4530 686 SUPERFAMILY GroES-like 348 513 IPR011032 -
Lja3g4530 686 PANTHER PROSTAGLANDIN REDUCTASE 346 685 IPR045010 GO:0016628
Lja3g4530 686 PANTHER PROSTAGLANDIN REDUCTASE 1 345 IPR045010 GO:0016628
Lja3g4530 686 CDD double_bond_reductase_like 349 683 - -
Lja3g4530 686 CDD double_bond_reductase_like 4 342 - -
Lja3g4530 686 Pfam N-terminal domain of oxidoreductase 352 463 IPR041694 -
Lja3g4530 686 Pfam N-terminal domain of oxidoreductase 7 116 IPR041694 -
Lja3g4530 686 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 346 685 - -
Lja3g4530 686 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 1 345 - -
Lja3g4530 686 SUPERFAMILY GroES-like 3 172 IPR011032 -
Lja3g4530 686 Gene3D - 353 681 - -
Lja3g4530 686 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 305 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4530 Lja-Chr3 87051876 87070226 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4530 K19825 - gmx:100811802 604.364