Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4528 ATGGGACAAGTCTTTGACAAACTACAAGGTAAGGATTGGAGGGAAAAGCAAATAAGGAAGATAACCGATCGAGTTTTTGAACGAGTAAAGAGTCAAATGCAAACTAATAATTTGTGTTTTGAAGAACTGTATATTGCTGTATTACTTGTGTACAATGATATCAATAAGTATATTCCTGGTCCCCATTTTGATCCTCCATCAAAAGAAAAAGTCAGAGAAGTCATGAAGAACTGCGATATCAACTTCGATGGAGAAATTGATCCCGAAGAATTTTACAGTTTCATCCAGATAATGACAGCTGACACAGTCACTTTTGTTGGTCAAAAGCTTATCATCACTTTGGTTGTAGCACCGGCGGTGGCGGTGGCAACGAAGAAAGCCACTGAAGGTGTCCCAGGTGTTGGGAAACTGGTGCAAAGGTTACCCAACTCAGTTTATGCTTCTCTTGTGACACTTGCAGCTGTGTGGTTCCAGAACGCGGCACAGGATTCTCAGAACTTCTAG 504 0.4127 MGQVFDKLQGKDWREKQIRKITDRVFERVKSQMQTNNLCFEELYIAVLLVYNDINKYIPGPHFDPPSKEKVREVMKNCDINFDGEIDPEEFYSFIQIMTADTVTFVGQKLIITLVVAPAVAVATKKATEGVPGVGKLVQRLPNSVYASLVTLAAVWFQNAAQDSQNF* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4528 167 PANTHER CALCIUM-BINDING EF HAND PROTEIN 4 163 - -
Lja3g4528 167 SUPERFAMILY EF-hand 36 101 IPR011992 -
Lja3g4528 167 Gene3D - 1 104 - -
Lja3g4528 167 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Lja3g4528 167 PANTHER S100 CALCIUM-BINDING PROTEIN 4 163 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4528 1 156 EF-hand Containing Proteins AT1G64850 68.590 5.41e-79 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4528 - - gmx:100527595 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4528 3 87043982 87048285 Lja3g4528 3 87043982 87048285 ECH