Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4525 ATGTCGCAGCTCAACAGCAACATCCCAGTGAGCGAAGCGTTCTGGACTCTCGTCGACAAAGCCGACAAGAAATTCTCCAAGATCAGAGACCTCCCTTACTACCAACGAAGCAGGCATGACACCTATTTCTACAAGGTTTTCAAGGTGTACACCCAGCTATGGAAGTTTCAGCAGGAGAATCGGCAGAAGCTGGTGGAAGCGGGGCTGAAGCGATGGGAGATTGGCGAGATCGCGTCGCGGATCGGGCAACTGTATTTCGGGCAGTACATGAGGACCAGTGACTCCAATTACCTATTGGAGTCGTATGTGTTCTATGAGGCGATACTGACTAGAGAGTATTTCAAGGAGGGTTTGTTTCAGGATGTGAATATTGCTAACAAGCAATTGCGGTTCCTCGCGCGGTTTCTCATGGTTTGTTTGGTTTTGAACCGGTGGGAGATGGTGCACCAGCTGGTTAATCAGCTTAAAGTATTGGTTGATGAATGCAAGAGGACTTTCCAGGAAAGTGACTTTAAAGAGTGGAAGCTGGTGGTTCAGGAAATAGTCAGATTTTTAAAAGCTGACACTGCTTTTACGAATATCAGACCCTTGAGATATAGTCTAGTTTTGGACCCTCATCCCGATACTTTACCACAGACGTCTGCAGCCATCACGAAGCGAAGTTTGAAATTACAAGACGCTGTATTAAGTAGCTTCCATCACAATGAGGTTAAGTTTTCAGAGCTCACAATTGACACTTTTAGGATGCTTCAGTGTCTGGAGTGGGAACCTAGTGGTTCATTTTACCAGGCTAGTGGTTCAAAACCTAGTCAGAATGGGGCAACTGGGACTACTCGTATCAGTTACATCCAAGATATTGCTGATCCTACCTTACCAGCAAATCCACGGAAAACTATATTATACCGTCCTTCACTGACTCATTTTATAGCTGTTCTTGCCACAATTTGTGAGGAGCTTCCTTCTGATGGTATTGTCCTGGTATATCTGTCAGCCTCAGGATCTGGTGGTGCTGCTGCACAGAACGAATCTGGTTGCATACCCTTTGGTCCCCATGGAGATAAAGGGTCAAACTGCATATATCCATCCGATTTTCTGCCGTTTACTAGAAGACCGCTTCTTTTAGTCATTGATAATGACAACAGCAAAGCTTTTAAGGTCATAGCAGAAGCAGAAAAGGGAAAGCCAGTAGCCATGCTCCTTTCTCCAAGCTGTACGCCTCCTGTTGAATTTGACTTTTCTCATCATTCAAATGGGAGCCTATTCACCATGTTTCTTACGGCTCCTCTGCAAGCTTTCTGTCTGCTACTAGGACATCAAGGCACTGATAATGATCTGGACATATACAACAAAGCTGAAATGCTTCTCTCATCATCATTAAATAACTGGGGACTTGCATTGGCAACATCAGAGACACTTGATTCAGTTTGGGGACAGGTTTTAGGTGACCCCTTCATAAGGAGACTTCTTTTGAGATTCATATTTTGCCAGGAAGTGTTGGCCAGGTATGCACCAGTTTATAATAAAAAGGAATTCCTTCCAACATGTGTCCCTTCTCTTCCATCGCCTGTTCTGCCCGTCAGTCACTCATATCAAAGTGTAATTCAGCAACTGGCCAGCATTTTTGGCGCGACTAAGTATTTCATCTTCTCTGAGGATGTTCTTCCTTAA 1668 0.446 MSQLNSNIPVSEAFWTLVDKADKKFSKIRDLPYYQRSRHDTYFYKVFKVYTQLWKFQQENRQKLVEAGLKRWEIGEIASRIGQLYFGQYMRTSDSNYLLESYVFYEAILTREYFKEGLFQDVNIANKQLRFLARFLMVCLVLNRWEMVHQLVNQLKVLVDECKRTFQESDFKEWKLVVQEIVRFLKADTAFTNIRPLRYSLVLDPHPDTLPQTSAAITKRSLKLQDAVLSSFHHNEVKFSELTIDTFRMLQCLEWEPSGSFYQASGSKPSQNGATGTTRISYIQDIADPTLPANPRKTILYRPSLTHFIAVLATICEELPSDGIVLVYLSASGSGGAAAQNESGCIPFGPHGDKGSNCIYPSDFLPFTRRPLLLVIDNDNSKAFKVIAEAEKGKPVAMLLSPSCTPPVEFDFSHHSNGSLFTMFLTAPLQAFCLLLGHQGTDNDLDIYNKAEMLLSSSLNNWGLALATSETLDSVWGQVLGDPFIRRLLLRFIFCQEVLARYAPVYNKKEFLPTCVPSLPSPVLPVSHSYQSVIQQLASIFGATKYFIFSEDVLP* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4525 555 PANTHER PROTEIN SCAI 339 553 - -
Lja3g4525 555 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 3 335 - -
Lja3g4525 555 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 339 553 - -
Lja3g4525 555 PANTHER PROTEIN SCAI 3 335 - -
Lja3g4525 555 Pfam Protein SCAI 17 343 IPR022709 GO:0003714|GO:0006351
Lja3g4525 555 Pfam Protein SCAI 352 502 IPR022709 GO:0003714|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4525 Lja-Chr3 87023911 87031727 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4525 - - gmx:100801761 935.25