Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4522 ATGGCGCAAGTGAGGAACAAGCAAGTGATTCTGAAGGACTATGTCTCTGGTTTTCCTAAGGAATCCGACATGGAAATTGTCGAGAGCACCATCACTCTGAAACTTCCAGAAGCTTCCAATGAGGTGCTGCTCAAAAATCTCTACTTGTCATGTGATCCATACATGCGAATCCTCATGGCCAAGCCAGAAGGCACTCCCAATCCTCGTACCTACACCCCTGGCTCTCCATTAGTAGGGTATGGTGTGTCTAAAGTCCTGGAATCTGGACACACAGATTATAAGGAAGGTGATTTGGTGTGGGGGTTTACTAAATGGGAAGAGTATAGCTTGGTCTCTTCAGCTCAAATACTTTTCAAAATTGAGCATACCGATTTCCCTCTTTCGTATTATACTGGAATTCTTGGTATGCCAGGAGTGACGGCATATGCAGGTCTCTTTGAAGTGGGCTCTCCCAAGAAAGGAGAGAATGTGTTTGTTTCAGCAGCCTCTGGTGCAGTTGGTCAACTTGTTGGCCAATTTGCTAAACTTACAGGTTGTTATGTTGTGGGAAGTGCTGGAACAAAAGAAAAGGTTGATCTATTGAAGAATAAATTTGGGTTTGATGGAGGTTTTAACTACAAGGAAGAGCCTGACCTCGATGCAGCTTTGAAAAGGCACTTTCCAGAAGGCATTGACATTTACTTTGAGAATGTTGGGGGCAAGACACTCGATGCTGTACTCCTGAATATGAGAGTCCACGGTCGCATCCCTGTCTGTGGAATGATTTCACAATATAATCTTGCTCAACAGGAAGGTGTACAAAATTTGGCACACCTCATATATAAGCGGATTCGCATGCAAGGGTTTATGTTCAGTGATTTCTATCACCTATATCCCAAATTCTTGGAGTTTGTCCTGCCTCATATCAGAGAGGAAAAAATTGTGTATGTGGAAGACATAGCGGAGGGTCTTGAGAATGGTCCTGCAGCTGTGGTTGGCCTTTTTAGTGGTCGCAATGTTGGAAAACAAGTGTTGTTGTTGCTCGTGAATGAAAATCTTTTCTGGCATTATTATGGTATCAGATTTTGTTCTGAATTCTTATTGAAAATTTAG 1092 0.4277 MAQVRNKQVILKDYVSGFPKESDMEIVESTITLKLPEASNEVLLKNLYLSCDPYMRILMAKPEGTPNPRTYTPGSPLVGYGVSKVLESGHTDYKEGDLVWGFTKWEEYSLVSSAQILFKIEHTDFPLSYYTGILGMPGVTAYAGLFEVGSPKKGENVFVSAASGAVGQLVGQFAKLTGCYVVGSAGTKEKVDLLKNKFGFDGGFNYKEEPDLDAALKRHFPEGIDIYFENVGGKTLDAVLLNMRVHGRIPVCGMISQYNLAQQEGVQNLAHLIYKRIRMQGFMFSDFYHLYPKFLEFVLPHIREEKIVYVEDIAEGLENGPAAVVGLFSGRNVGKQVLLLLVNENLFWHYYGIRFCSEFLLKI* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4522 363 SMART PKS_ER_names_mod 30 338 IPR020843 GO:0016491
Lja3g4522 363 Pfam Zinc-binding dehydrogenase 165 298 IPR013149 -
Lja3g4522 363 Gene3D - 8 338 - -
Lja3g4522 363 Pfam N-terminal domain of oxidoreductase 7 115 IPR041694 -
Lja3g4522 363 PANTHER PROSTAGLANDIN REDUCTASE 1 339 IPR045010 GO:0016628
Lja3g4522 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 132 304 IPR036291 -
Lja3g4522 363 CDD double_bond_reductase_like 4 336 - -
Lja3g4522 363 SUPERFAMILY GroES-like 3 170 IPR011032 -
Lja3g4522 363 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 1 339 - -
Lja3g4522 363 Gene3D - 133 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4522 Lja-Chr3 87005940 87008761 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4522 K19825 - gmx:100809668 612.453