Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4515 ATGTCCATTCAAGCTTTTCTCGCCTCTTCTTCCTCTTCATTCCACTCCCACCTTCACCATTCTTCCACAACTTCATCTCCATCACTCCCTGCCGCACGGTGGTTCCGATCATACCCTTCGAAGAAGTCTCTGAAGCTGAATTGCAGTTCAAATGGCAATAGCGGCGACCAGGATTATTTGCTGGATGCTCCAGAATCTGTTGGAGATGGATTCTCTTTTAGTGGAGGAAAATATTCAGATGGGCCGAGTCCAAGTGATGATTGGTTTAAGCAAGGGAAAATGATTAGAGCCTATTCCAATGCTGGCACCAGTGAAAAGGCAAAAGATCCAATTTTTGGGCTCACTATGGGTGCTAGCTCTCAATCTTCTGGTAATAGTTTCAGATGGTTTTGTGTTGAACGCGGAAGTGCTGATAATCCTTCAGTGATATTAATCCATGGTTTCCCTTCACAGGCATATTCTTATCGTAAAGTTCTTCCAGTACTCTCCAAGGACTATCATGCCATAGCATTTGACTGGCTAGGATTTGGGTTTTCTGATAAGCCTCAACCTAAATATGGGTTTGACTACACACTAGATGAATATGTATCATCATTGGAGTCACTTATTGATGAACTGGCTGTTACTAAAGTCTCACTTGTTGTCCAGGGATATTTTTCGCCAGTCGTAGTTAAGTATGCAAGCAGTCACCAGGAAAAGATAAACAACTTAGTACTCCTTAATCCACCTCTAACAGCCCAACATGCCAAGCTTCCATCAACGTTGTCCATATTCAGCAACTTTCTGCTAGGTGAAATATTTTCACAGGATCCCTTAAGGGCTAGTGACAAAGCTCTGACAAGCTGCGGCCCGTATAAAATGAAAGAAGAACATGCAATGGTCTATAGAAGACCCTATCTCACATCTGGTTCTTCAGGCTTTGCACTAAATGCAATTAGCAGGACCATGAAGAAAGAACTCAAGGGGTATGTGGACAATATGCAAACAATACTTAAGGACAAAAACTGGAAAGTTCGAACCACAATATGTTGGGGCCAAAGAGACCGCTGGTTGAGCTATGATGGAGTGGAAGATTTCTGCAAGGATTCCAACCATACACTTATTGAGGTTCCAACGGCTGGTCATCATGCGCAGGAAGATTGTGGTGAAGAACTTGGACAACTTATTTATAAGATACTAAGCAAAAGGAAATAG 1194 0.4255 MSIQAFLASSSSSFHSHLHHSSTTSSPSLPAARWFRSYPSKKSLKLNCSSNGNSGDQDYLLDAPESVGDGFSFSGGKYSDGPSPSDDWFKQGKMIRAYSNAGTSEKAKDPIFGLTMGASSQSSGNSFRWFCVERGSADNPSVILIHGFPSQAYSYRKVLPVLSKDYHAIAFDWLGFGFSDKPQPKYGFDYTLDEYVSSLESLIDELAVTKVSLVVQGYFSPVVVKYASSHQEKINNLVLLNPPLTAQHAKLPSTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYKMKEEHAMVYRRPYLTSGSSGFALNAISRTMKKELKGYVDNMQTILKDKNWKVRTTICWGQRDRWLSYDGVEDFCKDSNHTLIEVPTAGHHAQEDCGEELGQLIYKILSKRK* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4515 397 PRINTS Alpha/beta hydrolase fold signature 340 354 IPR000073 -
Lja3g4515 397 PRINTS Alpha/beta hydrolase fold signature 227 240 IPR000073 -
Lja3g4515 397 PRINTS Alpha/beta hydrolase fold signature 165 180 IPR000073 -
Lja3g4515 397 Gene3D alpha/beta hydrolase 115 396 IPR029058 -
Lja3g4515 397 Pfam alpha/beta hydrolase fold 140 379 IPR000073 -
Lja3g4515 397 PANTHER HYDROLASE-LIKE 50 395 - -
Lja3g4515 397 SUPERFAMILY alpha/beta-Hydrolases 125 395 IPR029058 -
Lja3g4515 397 PANTHER EPOXIDE HYDROLASE 50 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4515 Lja-Chr3 86956546 86963154 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4515 123 251 Acyl Lipid Metabolism Gene Families AT3G05600 30.303 1.41e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4515 - - gmx:100809126 661.373