Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4514 ATGGCGTTACAGTTTCTGAAGCAGCACCCCTTAGGTTTTCAGAGCGAAACAGCCCTATCATTCCTCTCTCGGTTTCGCAATCTAAACCTCCATGCCACAGTGAGTTCAATTGATGGTCATGTTCCAGCTTCCTTTAGGAGCTATGCGACTGCAAAATCGGAAAAGATTGTACCTGTGAAGAAGAAAAAGCGGTTGGATGAAACATGTCTTGATAGATATCAACAATATAGTAGATCCATCATTCAGTCATGGATTTTGCAAGGCAAAGTACGTGTGAATGGGAAGGTGGTAAATAAAGCTGGTACCCCTGTGTCTGAAAAAGCTGTTGTGGAGATAATGGCTGAAGTTCCGAAATACGTATGTAGAGCTGGATATAAGTTGGAAGCTGCCATTGACCAGCTGGGTGTTGATGTTGCTGGTAAAGTAGCTCTTGATTCTGGACTGTCAACTGGAGGATTTACTGACTGCTTACTTCAGTATGGTGCATCACATGTTTATGGAGTGGACGTAGGTTATGGACAGGTAGCTGATAAAGTTCGACGAGATGAACGTGTGTCTGTTATAGAGCGGACAAATTTAAGATATCTTGCAGAGCTCCCACAAAACGTTGATTTGGTGACTTTGGACCTCTCATTCATCTCTATTCTTCTGGTCATGCCTGCAGTTATCAATGTTATGAAGGAAGATGCAGAATTAGTGACGTTGGTTAAACCACAATTTGAAGCTCTCAGATCTCAGGTAGGAAAAGGGGGGATTGTGAAAGATCCCATTGTCCATCAAGAGGTGAGTGGTTTTGGCTCTTTGATCTGCTTGTTTATTGTCATCAATGTTCAAAATATAATTATGGGAAATCTAAATATTAGAGGACGAATGGCATGCGAAATCACATTCACACAAACAAAATGCTTTATATTCTGCCCTCCATTCAATTTTATGATTTACCCCCTTCTAAGTTTCAAATAA 963 0.4102 MALQFLKQHPLGFQSETALSFLSRFRNLNLHATVSSIDGHVPASFRSYATAKSEKIVPVKKKKRLDETCLDRYQQYSRSIIQSWILQGKVRVNGKVVNKAGTPVSEKAVVEIMAEVPKYVCRAGYKLEAAIDQLGVDVAGKVALDSGLSTGGFTDCLLQYGASHVYGVDVGYGQVADKVRRDERVSVIERTNLRYLAELPQNVDLVTLDLSFISILLVMPAVINVMKEDAELVTLVKPQFEALRSQVGKGGIVKDPIVHQEVSGFGSLICLFIVINVQNIIMGNLNIRGRMACEITFTQTKCFIFCPPFNFMIYPLLSFK* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4514 320 TIGRFAM tly: TlyA family rRNA methyltransferase/putative hemolysin 64 261 IPR004538 GO:0003723
Lja3g4514 320 Pfam S4 domain 64 110 IPR002942 GO:0003723
Lja3g4514 320 Pfam FtsJ-like methyltransferase 119 261 IPR002877 GO:0008168|GO:0032259
Lja3g4514 320 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 262 IPR029063 -
Lja3g4514 320 SMART s4_6 63 128 IPR002942 GO:0003723
Lja3g4514 320 CDD S4 63 112 - -
Lja3g4514 320 ProSiteProfiles S4 RNA-binding domain profile. 63 123 - -
Lja3g4514 320 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 59 262 - -
Lja3g4514 320 Gene3D Vaccinia Virus protein VP39 122 271 IPR029063 -
Lja3g4514 320 SUPERFAMILY Alpha-L RNA-binding motif 63 115 - -
Lja3g4514 320 Gene3D - 51 119 IPR036986 GO:0003723
Lja3g4514 320 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 59 262 IPR004538 GO:0003723
Lja3g4514 320 CDD AdoMet_MTases 144 223 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4514 K06442 - gmx:100781303 404.831