Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4510 ATGGCCGATCGCTTCTTTCCGAACGAGATGCCTCCCTTCATGGCAGAGACCACACCTCAACAAGCTCTTCCCTCCCAAACACCGCTATCAGACTCCCTCACCACCCTCCTTTCTCTTCCTCACCAAACACTCGCCGCAAAGTTCCAGTCTGCAGCATTACACTTGAAACAATCGGTGGTGAGGGAGACTTGGGGGTCCAGTGGGAATCGTGTGAAGGATTATACTCTTTACACGGGGGCTCTTGGGACAGCATTCTTGGTTTTCAAGGCCTATCTAGTAACCAAGAATGAGAGTGATCTTAACTTGTGCTCAGAGATTGTTAAGGCTTGTGATTCTGCTTCAGCATGTTCTAGCCGTGTGACGTTCATCTGTGGGCGTGCTGGTGTATGTGCTCTTGGTGCTGTCGTAGCTAAGCATAATGGTGATGAAAGGCTACTTAACTATTACCTAAGACAATTCAAAAAGATTGAGCTACCTCGTGATTTGCCTTATGAGCTATTGTATGGCAGAGCAGGTTACTTATGGGCATGCTCATTCTTAAACAAGCATATTGGTGAACACACAGTGCCTACTCCTCAAATGAGATCGGTTGTGGATGAAGTTCTTGCAGCTGGTAGACAATTGGCTCACAAGGGAAGATGTCCTTTGATGTATGAATGGCATGGGAAGAAATACTGGGGTGCTGCCCATGGTCTTGCAGGAATTATGAATGTTCTGATGGACATGGAACTCAAGCCAGATGAGGTGGAAGATGTTAAGGTCACACTACGGTACATGATTAAGAATCGGTTCCCTAGTGGAAATTATCCCTCTAGTGAAGGAAATGAATCTGACCGTCTTGTGCATTGGTGTCATGGTGCTCCTGGACTCACTCTTACGCTTGTAAAAGCTGCTGAGGTTTTTGGGGATAAGGAATTTATACAAGCAGCTGCAGATGCAGGAGAAGTAGTGTGGAAGAGGGGTCTGCTTAAGAAAGTTGGAATCTGTCATGGCATTAGTGGGAACACCTATGTCTTTCTCTCCCTGTACAGATTGACCGGAAAGGTGGAGTACTTGTACATGGCTAAAGCATTTGGTTGCTTTCTACTTGATAGAGCACAGAAATTGATCTCAGAAAGAAAGATGCATGGAGGAGATCGCCCGTTTTCCTTATTTGAAGGTCTTGGAGGAATGGCATATATCTTTCTAGACATGATTGATCCTCAACTGGCAAGGTTCCCAGGCTATGAACTTTGA 1236 0.4571 MADRFFPNEMPPFMAETTPQQALPSQTPLSDSLTTLLSLPHQTLAAKFQSAALHLKQSVVRETWGSSGNRVKDYTLYTGALGTAFLVFKAYLVTKNESDLNLCSEIVKACDSASACSSRVTFICGRAGVCALGAVVAKHNGDERLLNYYLRQFKKIELPRDLPYELLYGRAGYLWACSFLNKHIGEHTVPTPQMRSVVDEVLAAGRQLAHKGRCPLMYEWHGKKYWGAAHGLAGIMNVLMDMELKPDEVEDVKVTLRYMIKNRFPSGNYPSSEGNESDRLVHWCHGAPGLTLTLVKAAEVFGDKEFIQAAADAGEVVWKRGLLKKVGICHGISGNTYVFLSLYRLTGKVEYLYMAKAFGCFLLDRAQKLISERKMHGGDRPFSLFEGLGGMAYIFLDMIDPQLARFPGYEL* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4510 411 Gene3D - 1 411 IPR012341 GO:0005975
Lja3g4510 411 PRINTS Eukaryotic LanC-like protein family signature 297 318 IPR020464 -
Lja3g4510 411 PRINTS Eukaryotic LanC-like protein family signature 397 411 IPR020464 -
Lja3g4510 411 PRINTS Eukaryotic LanC-like protein family signature 2 15 IPR020464 -
Lja3g4510 411 PRINTS Eukaryotic LanC-like protein family signature 214 226 IPR020464 -
Lja3g4510 411 PRINTS Eukaryotic LanC-like protein family signature 260 275 IPR020464 -
Lja3g4510 411 PRINTS LanC-like protein superfamily signature 73 91 IPR007822 -
Lja3g4510 411 PRINTS LanC-like protein superfamily signature 280 300 IPR007822 -
Lja3g4510 411 PRINTS LanC-like protein superfamily signature 164 179 IPR007822 -
Lja3g4510 411 PRINTS LanC-like protein superfamily signature 381 398 IPR007822 -
Lja3g4510 411 PRINTS LanC-like protein superfamily signature 326 339 IPR007822 -
Lja3g4510 411 PRINTS LanC-like protein superfamily signature 225 241 IPR007822 -
Lja3g4510 411 PANTHER LANC-LIKE PROTEIN 1 411 - -
Lja3g4510 411 CDD euk_LANCL 76 407 - -
Lja3g4510 411 SUPERFAMILY LanC-like 68 411 - -
Lja3g4510 411 PANTHER LANC-LIKE PROTEIN GCL2 1 411 - -
Lja3g4510 411 Pfam Lanthionine synthetase C-like protein 71 411 IPR007822 -
Lja3g4510 411 SMART LANC_like_2 70 411 IPR007822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4510 Lja-Chr3 86909250 86912545 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4510 - - gmx:100786158 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4510 3 86909250 86912545 Lja3g4510 3 86909250 86912545 ECH