Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4506 ATGGAGCCAAATTCTCGTCTTGATCATGCCCTTTTTCAACTCACCCCAACCAGAACCAGATGTGACTTGATCATTGTTGCTGGTGGAGTGAATGAGAGACTAGCTTCTGGGATCTTAGAACCGTTTCTTTCTCACCTCAAGAGTGCTAAGGATCAGATTTCCAAAGGTGGCTATTCCATCACTCTGCATCCACCTGTTGCACATGCTCCCTGGTTCACCAAAGCTACCCTTTTAAGGTTTGTTAGATTTGTGAGCACCCCAGAAGTGCTAGAGAGGTTTGTGACAATAGAAAAGGAGATAGTGCAGATTGAAGATTCGATTCAGTCGAGTGAGAAGGGAAATTTAGTGGCAGAGACAGAAGGAAATGTGTCATCAGCTGATGGGCGTATCAAAAGGTCAACTACTTCCAAGCTGAAAGATGAATTGAGTGGAACCAATCAAGAAGGATATGAAGAAAACTCTAGGGTTCGCCTTCAGCGTGTTCTGGATAATCGTAAAGCTATGCTTTGCAAAGAACAAGCAATGGCCTATGCCCGCGCTTTAGTTGCGGGATATTACCCAGAATCTCTGGATGATCTCATATGTTTTGCTGATGCTTTTGGAGCTTCACGTTTAAGGCAAGCATGTGTAAATTTCTTAGAGCTCTGCAAACAAAAGAATGAAGACAAGCGCTGGATAGATGAGATAGCAGCCATGCAGGCGTTTTCTCATCCCGAATTGCCTTACCTGAGGACATCCGGAATCATACTCGACGGTGAAGATGATCCAAGCAATAAACTTAATGGTGATGGCTCAATTTCTGAGTCGACCCCGAGCCATGCAAGTTTGGACATTGGCCAAGGTCAAACACCATCAACAGATGGAAGGGCTCAAATACCAATGTCCTGGCAAAACCATCATCCACAGTTCATTCACAATTTTCAGGGTCATGCATTTCAACAAATGCCCCCATACCTGTATCCTGGAATGCCAGTTCCCCCTGCATATTATCCAGGGAATGTTCAATGGCCTCCAAATGGAGAAGGCTCGCATTTTGACCGAGAAATGGATTCTCATAAATCATCCTATAAGAAGAAGAAGAAGAAGAAACATTCTCAAGTACTGGAGCACTCTGATGAAAACGGATCAACTGCATCCTCTAACTCTAGTGATGAGAGCGATTCAGATGACCATTCAAGGCCAAGCAGAAAGAGTTCTTCAACAGAGAATCTTCACAAAAAGAAGCACGGAAAGAAGTCTTCGAGGAAAGTAGTTATACGCAATATAAACTATATAACCTCTAATGGAGATGGTGAAAAAGGTAGTGTCACAGAGGGGAGTTTGTCCAATGAGGAAGAATTTATCAATGGAGATTCCCTGAAAAACCAGGTAGAGGAAGCTGTAGTGTCACTGGAGAGAAGACACAAGTCAAGTTCCCGTCACCATAAAAAACAACATAGCGCAAAGCATCCTGACAAACTAATTGGTTCAGATGATGCTGATTCCAATGGCATAAAAGGCAATAACAACTGGGATGCTTTCCAGAATCTCCTTTTGAGAGATGATGATTCTACCCCTGATACGGAAAAACAGCCTATTAAGTTTCAGGAGGAATATATTGTGAACAAGAATTTTGAGGATGATTCCTTTGTTGTTGCTGGGAGAGAATTGGACAGCAAGGGCCGGAATCGGGTTGAATACTTTAAGGAAGGGAAGGATGCAGCTTCATCTATCAAGAAAAAAATTAGCACAGATGAGGAGTTGTTGTTTTCTCGGAGAAATGAAGAATTAAGTGGCTACTCTGATTCAACTGTGCCTGGCCTAGAAACTTCCCTCACTAAATGTCAGAAAGAAGAGGACTGGCTCATTGTCAATCAATCTGATAAACCAACAAATGAAGATCGATACCGTGACTTTAGAACTTTTAATGGTGTAGGGAAAAACAAGAAAGATATTTTGGGCGATGACTCTTTCATGATTCAATCACGATCATCGGAAGATCAATTCCATTCTCAATCAGCAGCTGACATAAGTATGGTTTCAGACATTGTTGGTGCTACTGAACTCACAAACAGCAAGCAAGAAGGTTCACACAATAAGACTGGAACCTTAAATTCCCACGAGCCAGATGATCTCTTCATGGTTCTCGAACGTGATTCAGCTGTAGAGCGGACTGCAGCACCGTGGACCATGGAAATGGATCTTGAAAATAACATTTCTTCAAATAAAGAAAATAAAAAGCTTTCTGACATTGGAAATGATAAAAATAGTCTATCTAATCCTAAGGGAGCTGGTACGAAAACTCCTGGAGTGCGAACTGGGAAAGTTTCAAGTAAAGATGCAAAGTCTAAGGCTCAAAATGCTTCCCTTGGGAAAACCAAATCCGATATCATGTCAAGAAGCAAAGTATCACCTGGAAGCAGAACTACAGTTACGAAGAGCAAAACTGTTAAGGAAGAAGAAACTAGAAAGAGAAAGGAGGAATTACTGATTCAGCGGCAGAAAAGAATTGCGGAACGAAGTGCCGCTAAGAAGACTGGATCACAAACTAAGACTTCTGCAAAGAAAGAGAACCCTAAGATTCATCCATCCAGTGAGGACATTAAGAAAGTGCGCAAACCAGTCCTCAGGAGTTCCACCATTGATCGCCTCGCAACCGCCCGAGTAAGTCAGCAAAAGGTTACACCAACCGTAGCTAAATCAGGTCCAACCAAGAAACCTCCCGTGAAGGCAAGTGGAAAAGGGGTACCTTTGCAGAAGACTTCTGGTACAGAAAAGAAGAAACAGGGCCCAAAAGAAGTCAAAACTTCAAATCATAAAGAAGATGCAAAGAAAACAAAGGGGCCAGTTCTTTCTACAACAAATGCTAAGGCTAAAACTGAAATTTCTGTCACTAATGGCAAGGCTAAAACTGAAATGGAAGCTTCAGTAGTATTGCCATTGACTTCTGTTGCTGTGCAATCTGTTGAACCAAATAACAAAAATCTTGGTGTGACAGAGAAACATGCAAGATATTTTGAAAATGTTGGCCAGCTTCACATGGATTCATCTGAGCCAAATCATGGTCATGCATTGGGAGAAAATCAGTCTAGAGGTGAAGGAGTATTCAACAAGTTATCTTCACTTCCTGGTGATAACAAACCTCAACATAATACTGAAGGGGTCATAAATCCTACACCTGCTGCAATAGCTAGCAAAACCCTTACAGTTTCTGCTGTGAATTCAGTGGTTAATCAGAAAATTGATGAAAGCAATGCTGTTCCACCTAAAGTCTCTGAGATACAAATTTCTACCCCTCCACCTAGACCTAGTAACCAAGTGATGTCAGAATCAATCCACTCCAGGAAGAAATGGAACAATGATGAGGATTCTTTGAAAGCAGCCAAAGGATTTCGTAAGCTTCTCTTCTTTGGAAGAAGGAGCTGA 3405 0.4191 MEPNSRLDHALFQLTPTRTRCDLIIVAGGVNERLASGILEPFLSHLKSAKDQISKGGYSITLHPPVAHAPWFTKATLLRFVRFVSTPEVLERFVTIEKEIVQIEDSIQSSEKGNLVAETEGNVSSADGRIKRSTTSKLKDELSGTNQEGYEENSRVRLQRVLDNRKAMLCKEQAMAYARALVAGYYPESLDDLICFADAFGASRLRQACVNFLELCKQKNEDKRWIDEIAAMQAFSHPELPYLRTSGIILDGEDDPSNKLNGDGSISESTPSHASLDIGQGQTPSTDGRAQIPMSWQNHHPQFIHNFQGHAFQQMPPYLYPGMPVPPAYYPGNVQWPPNGEGSHFDREMDSHKSSYKKKKKKKHSQVLEHSDENGSTASSNSSDESDSDDHSRPSRKSSSTENLHKKKHGKKSSRKVVIRNINYITSNGDGEKGSVTEGSLSNEEEFINGDSLKNQVEEAVVSLERRHKSSSRHHKKQHSAKHPDKLIGSDDADSNGIKGNNNWDAFQNLLLRDDDSTPDTEKQPIKFQEEYIVNKNFEDDSFVVAGRELDSKGRNRVEYFKEGKDAASSIKKKISTDEELLFSRRNEELSGYSDSTVPGLETSLTKCQKEEDWLIVNQSDKPTNEDRYRDFRTFNGVGKNKKDILGDDSFMIQSRSSEDQFHSQSAADISMVSDIVGATELTNSKQEGSHNKTGTLNSHEPDDLFMVLERDSAVERTAAPWTMEMDLENNISSNKENKKLSDIGNDKNSLSNPKGAGTKTPGVRTGKVSSKDAKSKAQNASLGKTKSDIMSRSKVSPGSRTTVTKSKTVKEEETRKRKEELLIQRQKRIAERSAAKKTGSQTKTSAKKENPKIHPSSEDIKKVRKPVLRSSTIDRLATARVSQQKVTPTVAKSGPTKKPPVKASGKGVPLQKTSGTEKKKQGPKEVKTSNHKEDAKKTKGPVLSTTNAKAKTEISVTNGKAKTEMEASVVLPLTSVAVQSVEPNNKNLGVTEKHARYFENVGQLHMDSSEPNHGHALGENQSRGEGVFNKLSSLPGDNKPQHNTEGVINPTPAAIASKTLTVSAVNSVVNQKIDESNAVPPKVSEIQISTPPPRPSNQVMSESIHSRKKWNNDEDSLKAAKGFRKLLFFGRRS* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4506 1134 MobiDBLite consensus disorder prediction 682 702 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 340 417 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 745 759 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 876 892 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 1085 1111 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 384 401 - -
Lja3g4506 1134 PANTHER COP1-INTERACTING PROTEIN 7 1 1134 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 253 293 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 773 805 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 1090 1106 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 402 416 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 466 495 - -
Lja3g4506 1134 PANTHER COP1-INTERACTING PROTEIN-RELATED 1 1134 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 848 870 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 682 696 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 726 952 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 806 835 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 468 482 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 260 293 - -
Lja3g4506 1134 MobiDBLite consensus disorder prediction 918 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4506 Lja-Chr3 86866046 86873646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4506 - - gmx:100815598 1489.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4506 3 86866046 86873646 Lja3g4506 3 86866046 86873646 ECH