Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4498 ATGGCGTCAGTCCACAGCGCCGTCGCTCCGCACAGCCTCTTGCCTTCAATTCCCAAACCGAAGACCCCTCACGCGAATGCGCAGAACTTTCCGGCGTTGAGATTTTCCCGGAAACCGATTTTCCCGGGAAACAAACTCTCAGTGGCGGCGAAATCGGCGGTGGAAGATGCCGACGTGGTATTGGTGCAAAGCAGCGATGTTACGGACCAGCAAGAGGGCGTAGTGGTGGTGAGCCGTGTGGAGATGGAAGGTGGTGATTTCGTAGCAAAGGAGGGGTTGTTATCGTTGGAAGGGTTTTCTTCTTCTTCTTCTTCTCCGGGTTTGGTTGGAAATGGGAGTGAGGAGAGCATGGAGAAGCTGATTGATAGGACTATCAATGCTGCTATTGTTCTTGCGGCTGGTACTTTTGCTGTCACCAAGCTTCTTACCATTGATAGTGATTACTGGCATGGATGGACACTTTATGAGATTGTAAGATATGCCCCTCAGCACAACTGGACTGCTTATGAGGAAGCTCTTAAGACAAATCCAGTTTTCGCCAAGATGGTGATCAGTGGTGTTGTTTACTCTGTTGGGGACTGGATTGCACAGTGCTTTGAAGGAAAACCTCTCTTTGAGTTTGACCGTGCGCGGATGTTCAGATCAGGCCTTGTTGGTTTTACTCTACATGGCTCTCTTTCTCATTACTATTATCAGTTTTGCGAGGAGCTATTTCCTTACAAAGGATGGTGGGTAGTTCCTGTCAAAGTTGTCTTCGATCAAACTGCATGGTCGGCAGTTTGGAACAGTATCTATTATACAGTTGTAGGATTCCTGCGTTTTGATTCTCCGATCAATATTTTTAATGAATTGAGGGCAACATTTTTTCCCATGTTGACGGCAGGGTGGAAGCTGTGGCCATTTGCTCATCTCATTACTTACGGTGTAGTACCAGTTGAGCAAAGACTTCTTTGGGTGGATATGGTAGAGCTTATTTGGGTGACCATACTTTCAACATATTCAAATGAAAAATCAGAAGCAAGAAACTCTTCGGTACTTCCTGAAGTGACATCTACTACATCTGTTCACCCTCCTGAGGAGAAACGAGAAGAGTTATGA 1098 0.4636 MASVHSAVAPHSLLPSIPKPKTPHANAQNFPALRFSRKPIFPGNKLSVAAKSAVEDADVVLVQSSDVTDQQEGVVVVSRVEMEGGDFVAKEGLLSLEGFSSSSSSPGLVGNGSEESMEKLIDRTINAAIVLAAGTFAVTKLLTIDSDYWHGWTLYEIVRYAPQHNWTAYEEALKTNPVFAKMVISGVVYSVGDWIAQCFEGKPLFEFDRARMFRSGLVGFTLHGSLSHYYYQFCEELFPYKGWWVVPVKVVFDQTAWSAVWNSIYYTVVGFLRFDSPINIFNELRATFFPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDMVELIWVTILSTYSNEKSEARNSSVLPEVTSTTSVHPPEEKREEL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4498 365 Pfam Mpv17 / PMP22 family 271 331 IPR007248 GO:0016021
Lja3g4498 365 MobiDBLite consensus disorder prediction 1 27 - -
Lja3g4498 365 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 35 359 - -
Lja3g4498 365 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 35 359 IPR007248 GO:0016021
Lja3g4498 365 MobiDBLite consensus disorder prediction 344 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4498 Lja-Chr3 86745037 86748543 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4498 169 339 Miscellaneous Gene Families AT2G14860 25.731 8.44e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4498 K13348 - gmx:100805057 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4498 3 86745037 86748543 Lja3g4498 3 86745037 86748543 ECH