Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4494 ATGGGTATCCCAATAAGCAAAGGCTTAACATTTGTCCTTCTGCTATTTGCATTCTTTGTGATGCATGTTGATGCTTTCTATGGAGTCTATTATTCAGATACTCAGACCTGTACCAACCGTAAGAGCCAATGCTTTCTGAAGAAAATACCATGCCCTCATGAATGCCCTTTGAAATCACCTTCTAATCCAAAAGCCAAAGTCTGTTATGTTGACTGTGATTCTCCCATGTGCAAAGCTTCTTGCAAAAGTCCCAAACCAAATTGCAATGGCCGTGGATCCGCGTGCTTGGACCCTCGTTTTGTTGGCGCAGATGGCATTGTTTTTTACTTCCATGGAAGGCGCGACGAGCATTTCAGTTTGGTGTCTGATGTCAACCTCCAAATCAATGCCCGTTTCATTGGCCTTAGGCCTTCAGGGAGACCAAGGGATTACACTTGGATTCAAGCTCTGGGAATCCTCTTTGATTCCCACAAATTTTCTGTTGAGGCCACCCCATCAGGAATTTGGGATGATGAAGTTGACCGTTTGAAGATCTCTTATGATGGAGCAGAACTTGTCATCCCAGAAGGTCACCTCTCTACATGGCAAGACCGAGAAAATCAACTTCGAGTCGAGAGAATATCAAGTAAGAATAGTGTGATCGTTACCATCCCTGAAATCGCAGAGATATCTGTCAATGTGGTGCCTGTTACCAAGGAGGATAGCAGAATCCATAACTATCAGATCCCTGATGATGATTGTTTTGCTCACTTGGAGGTGCAGTTTAACTTCTATGGTCTATCCTCCAAAGTTGAAGGAGTGCTTGGCAGGACTTACCAACCAGATTTTCAAAATCCAGCGAAGCCTGGCGTGGCAATGCCGGTAGTTGGAGGGGAAGACAAGTACAGAACCACGTCTCTTACTTCTGCAGACTGCCGTGTTTGTATGTTCTTACCGGCCGAAGCTTCTGAGAAGGCAGACTCAGTGATGGAATATGGCATGCTGGATTGCACTGGTAGTTCCAACAGTCGGAATGGTATAGTTTGCAAAAGATAA 1035 0.4493 MGIPISKGLTFVLLLFAFFVMHVDAFYGVYYSDTQTCTNRKSQCFLKKIPCPHECPLKSPSNPKAKVCYVDCDSPMCKASCKSPKPNCNGRGSACLDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGILFDSHKFSVEATPSGIWDDEVDRLKISYDGAELVIPEGHLSTWQDRENQLRVERISSKNSVIVTIPEIAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLEVQFNFYGLSSKVEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTTSLTSADCRVCMFLPAEASEKADSVMEYGMLDCTGSSNSRNGIVCKR* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4494 344 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 12 344 - -
Lja3g4494 344 Pfam Root cap 254 310 IPR009646 -
Lja3g4494 344 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-LIKE PROTEIN 12 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4494 Lja-Chr3 86678708 86680072 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4494 - - lang:109353708 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4494 3 86678708 86680072 Lja3g4494 3 86678708 86680072 ECH