Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4493 ATGGGTGTCTCAAGAAGCATAGGCTTAAGTACATTTGTCCTGCTATTTGCATTCTTTATGATGCATGTTGATGCTTTTTATTCAGATACTCAAACCTGCACCAACCGTAAGAGCCGATGTTTTCTCAAGAAAATACAATGCCCTCATGAATGCCCTTTGAAATCACCTTCTAACCCAAAAGACAAAGTCTGTTATCTTGACTGTGATTCTCCCATGTGCAAAGCTTCTTGCAAAAGTCGCAAACCAAATTGCAATGGCCGTGGATCCGCATGCTTGGACCCCCGTTTTGTTGGTGCAGATGGCATTGTTTTCTACTTCCATGGAAGGCGCGACGAGCATTTCAGCTTGGTGTCTGATGTCAACCTCCAAATCAATGCCCGCTTTATTGGCCTTAGGCCAGCAGGGAGACCAAGAGACTATACTTGGATTCAAGCACTGGGAATCCTCTTTGATTCCCACAAATTTTCTGTTGAGGCCACCCCATCAGGAATTTGGGATGATGAAATTGACCGTTTGAAGATCTCTTATGATGGATCAGAACTTGACATCCCAGAAGGTCACCTCTCCACATGGCAAGACCAAGAAAATCAACTTCGAATCGAGAGAACATCGAGCAAGAACAGTGTCTTGATTACCCTCCCGGAAGTCGCGGAGATATCTGTAAATGTGGTGCCTGTTACCAAAGAGGACAGCAGAATCCATAACTATCAGATTCCTGATGATGATTGTTTTGCTCACTTGGAAGTGCAGTTTAAATTCTATGGTCTATCCTCCAAAGTTGAAGGAGTTCTTGGCAGGACTTATCAGCCAGATTTTCAGAATCCGGCGAAGCCTGGTGTGGCAATGCCGGTAGTTGGAGGGGAAGACAAGTACAGAACCACTTCTCTCACTTCTGCAGACTGCAGTGTTTGTATGTTCTCTCCTGCTGAAGCTTTTGAGAAGGAAGACTCAGTGATGGAATATGGTATGCTGGATTGCACTGGTGGTGCTAACAGTGGGAATGGCATTGTTTGCAGAAGATAA 1023 0.4477 MGVSRSIGLSTFVLLFAFFMMHVDAFYSDTQTCTNRKSRCFLKKIQCPHECPLKSPSNPKDKVCYLDCDSPMCKASCKSRKPNCNGRGSACLDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPAGRPRDYTWIQALGILFDSHKFSVEATPSGIWDDEIDRLKISYDGSELDIPEGHLSTWQDQENQLRIERTSSKNSVLITLPEVAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLEVQFKFYGLSSKVEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTTSLTSADCSVCMFSPAEAFEKEDSVMEYGMLDCTGGANSGNGIVCRR* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4493 340 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-LIKE PROTEIN 11 340 - -
Lja3g4493 340 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 11 340 - -
Lja3g4493 340 Pfam Root cap 250 306 IPR009646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4493 Lja-Chr3 86676064 86677454 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4493 - - gmx:100808294 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4493 3 86676064 86677454 Lja3g4493 3 86676064 86677454 ECH