Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4490 ATGGGTTTCCTCTCTGTGAAAACTGTTCTAATCTCCACTGGTATTTTATCCATGGCTATGGGGTTGAAGCTCACAGTCCCAGTGGTTTCCAATTTCATCTTCACTGAAGCTGCTCCTACATTGTCCACGTTTTTCCTCACGTGCTTCACTCCTCCTTACCTCTACCTCCTTCTCAACTTCATCATCCTCACCATCGTTGCCACCTCCAAGCTCCACAACCACAACAACTCCCCGCCGGACACCGCGCTTCTTCCGACGGAGCCGCTCATCCACGCCGCCGATGTCGCCGCCTACGGTGTTCATATCCCCGCTCCTGAGCCGGTTAAGATCTTAGAAAACTCGCAAATCGACTACAACGGCGAAATGGAGACGACGCCGGTGAAGTTCTCCGGCGGATTTGAAATGGAATACAACGGCGTCGTTTCTGGTGGATACGTGTATGAGGTGGAGGCGAAAACGCATGCAGTTATCGGCGGCGGAGGAGGAGGTAACGGTTTTTCTGTTATCGGCGGCGAGGAGGAGAATCTTGCTCCGATTTTGCAGAGGAAGGAGTCGTTGGAATTCGCGTTTAACGATGAGAACGAGAAACCGCCGGTTTCCGCCAGATTCGGCCACCGGAAAACGGTTAGATCTAGCCCCGAAGGAGTGACGGTGGTTGCGTTGGGAGTGACGAAACCGAAGAGGCAGGAGACGCTGGAGAGCACGTGGAGGACGATAACGGAGGGGAGAGCGATGCCGTTGACGAGGCACTTGAAGAAATCGGAGACGATGGAGACTCAGCCGCGGCGGAACGCGGCGCCGCTGGCGGATTTGAACGGTCCGGTGATGAAGAAGTCGGAGACGTTCGGCGGCAGGGAGAAGAAGGCGGCGGCGGCTACGACGTCGTCGCCGGGATCCGGTGGGAAGCTGAGGAAGGAATCGTCGCTGAGTCAGGACGAGTTGAACCGGCGAGTTGAAGCGTTCATCAATAAGTTCAACGCGGAGATGAGGTTGCAGAGGCAGGAATCGCTGAGGCAGTACAAGGAGATGGTGAATCGAGTGTAA 1044 0.5546 MGFLSVKTVLISTGILSMAMGLKLTVPVVSNFIFTEAAPTLSTFFLTCFTPPYLYLLLNFIILTIVATSKLHNHNNSPPDTALLPTEPLIHAADVAAYGVHIPAPEPVKILENSQIDYNGEMETTPVKFSGGFEMEYNGVVSGGYVYEVEAKTHAVIGGGGGGNGFSVIGGEEENLAPILQRKESLEFAFNDENEKPPVSARFGHRKTVRSSPEGVTVVALGVTKPKRQETLESTWRTITEGRAMPLTRHLKKSETMETQPRRNAAPLADLNGPVMKKSETFGGREKKAAAATTSSPGSGGKLRKESSLSQDELNRRVEAFINKFNAEMRLQRQESLRQYKEMVNRV* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4490 347 PANTHER DUF761 DOMAIN PROTEIN 4 346 - -
Lja3g4490 347 Pfam Cotton fibre expressed protein 311 346 IPR008480 -
Lja3g4490 347 PANTHER COTTON FIBER (DUF761) 4 346 - -
Lja3g4490 347 Pfam Domain of unknown function (DUF4408) 40 71 IPR025520 -
Lja3g4490 347 MobiDBLite consensus disorder prediction 252 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4490 Lja-Chr3 86644457 86645897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4490 - - cam:101502389 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4490 3 86644457 86645897 Lja3g4490 3 86644457 86645897 ECH