Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4482 ATGCTAGAAGGCAAAGCAGTGATTGGTGAAACTGACATGCTCCAAACCATGCAGCAGGATGCTCTGCATTTAGCATCCAAAGCACTCGATTCCTTCGATGTCACCGAAGCAATTGAGATAGCCCAATTTATCAAGAAGGAATTTGATAGGACGCATGGACCTGGTTGGCAATGCATTGTAGGCACTGATTTTGGTTCATACGTGACTCACTGTTATGGCTGCTTTATCTACTTCTGCATAGGCACCTTGGCCATTTTGCTCTTCAAGGGTTCTGCTGTACCAGAGGCACACGAAAATTAG 300 0.4533 MLEGKAVIGETDMLQTMQQDALHLASKALDSFDVTEAIEIAQFIKKEFDRTHGPGWQCIVGTDFGSYVTHCYGCFIYFCIGTLAILLFKGSAVPEAHEN* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4482 99 Pfam Dynein light chain type 1 5 89 IPR001372 GO:0007017|GO:0030286
Lja3g4482 99 PANTHER DYNEIN LIGHT CHAIN 1 96 - -
Lja3g4482 99 SUPERFAMILY DLC 1 90 IPR037177 GO:0007017|GO:0030286
Lja3g4482 99 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 1 90 IPR037177 GO:0007017|GO:0030286
Lja3g4482 99 SMART Dynein_light_2 1 90 IPR001372 GO:0007017|GO:0030286
Lja3g4482 99 PANTHER DYNEIN LIGHT CHAIN 1 96 IPR001372 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4482 Lja-Chr3 86569373 86569817 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4482 K10418 - gmx:100779040 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4482 3 86569373 86569817 Lja3g4482 3 86569373 86569817 ECH