Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4476 ATGATGGCAAGCCTATTCCTAAAGCCCCATCTTCATCTTGTTCATCTTCCTTCCAAACTCATTTTCCCCATCACTCACAAACCTTCCCTTTCCCTTCCCACCACATTCTCTATCAAACACTTCACCACCACCACACTCTCCTATGGACCTTCCCTCCACAAAGGAACCACCCCATCCCAATCCCAATCTCAACACCAACTCCCTCTACCCCAAAACGACGTCGTTCTCCGCGAAGAAACCTTCACCAGAATCTACGACCTCGCCGCGCTCCGCGTCCCTTCCGCCGAGTGCTCCGCCTTAGAGAACCGCCTCCGCGGCCACCTCCTCAACTGGCCTCGCATTCGCAACATCGCTCGCGTCCCCGGCGACGACATCGACCCCAACCTCGCACCCCTCTTACCCAACGGTGACGACGGCGGAGAAGAAGAACAAGAAGGAAGCGCTCTCGTCTCGTTGCAGCGGCGCGTTCACGGCAAAGCGGACGGCGACGGCGAGGTTTTGAGCCCTGTGCTGTACCGGGAGAAGCTTGCGAACACGTTCAACAGTCGCGGGTTTGTCAATTTCCGGAACCTGGCGAAGATTTCGAGGCCGAATAGGAATAAGAAGAAGAAGAAGGAGGAGGAGGAGGAAGAGGGGAATGATAAAGTGGTTGAAGTTGAAGGGAGAAAGGGCTCTGGGAAGAACGATTTTGCGGCGGTTGAGGTTGTTGATGATGATGAGGAGGAGGAAGAAGATGGTGGTTTGAGGAAGTTGTTAGGTGAAGGATTTGGGAGGAGGAAATGGAGGGGTTCCACGAGGTTGTTGCTTTTGGATGAACGGTTCGCCGGTCATGGCGTGGAGGAGCTACCTGAGGCGATAAAGGCTGTCTTGAAGGAGTACACGGAAAAGAGTACAACTTTGACTTTTGAGCTAGTTAGATGCAGGCTAAAATTGTTTTATGATTACTGGCAGATGAATGAGACCTTGGAGGTGTTACTGCCTGAGGGTATGGTTGTTCCATCAGCTTTTGAGACTGTTGGTCATATTGCACACCTGAATTTGAGAGAGGAACATTTACCATACAAGAAGCTTATAGCAAAGGTTGTACTGGATAAAAATAAGCCAAAGATAAAAACAGTTGTGAACAAGATTGATTCCATTCAAAATGAGTACAGGACCATGCAGCTTGAGGTTTTAGCAGGAAACCACTCTCTTGTGACTACAGTAGTTGAGAATGGAATTCGCTTTCAGGTTGACTTAGCAACAGTATATTGGAATTCTAGGCTTGCAACTGAAAGGCAAAGGCTTCTGAGTGGCTTTACACGAAATGATGTTATCTGTGATGTTTTCTCTGGAGTTGGTCCCTTAGCCATATCTGCAGCAAGAATAGTTAAGCGTGTTTATGCTAATGACTTGAATCCATATGCCATTGAGTATCTGGAAAGAAATAGTGTTCTAAATAAACTTGAGAGGAAGATTAAGGTCTTTAACATGGATGGAAGAAGGTTCATTAAGGCTATATATGCCAGTGATAAAGCTCAGTCCATCACACAAGTGGTTATGAACTTGCCAAATGATGCTGCAGAATTTCTAGATGCATTTCGGGGAATATACAAAGATAGACCTAAGGATGGGGAATTTACTTTGCCAATGATCCATGTTTATGGATTCTCCAAAGCACGAGATCCAGAATTTGATTTTCATGAGAGAATAAGAATTGCGCTGCTAGAAGTGGCAGTCAATGTAGAAATGCGACGGGTACGACTTGTTGCTCCTGGAAAATGGATGTTGTGCGCATCATTTATTCTCCCCAAAAGTGTAGCATTTGCTAAAACCGCAGTTGATACTTGA 1830 0.4667 MMASLFLKPHLHLVHLPSKLIFPITHKPSLSLPTTFSIKHFTTTTLSYGPSLHKGTTPSQSQSQHQLPLPQNDVVLREETFTRIYDLAALRVPSAECSALENRLRGHLLNWPRIRNIARVPGDDIDPNLAPLLPNGDDGGEEEQEGSALVSLQRRVHGKADGDGEVLSPVLYREKLANTFNSRGFVNFRNLAKISRPNRNKKKKKEEEEEEGNDKVVEVEGRKGSGKNDFAAVEVVDDDEEEEEDGGLRKLLGEGFGRRKWRGSTRLLLLDERFAGHGVEELPEAIKAVLKEYTEKSTTLTFELVRCRLKLFYDYWQMNETLEVLLPEGMVVPSAFETVGHIAHLNLREEHLPYKKLIAKVVLDKNKPKIKTVVNKIDSIQNEYRTMQLEVLAGNHSLVTTVVENGIRFQVDLATVYWNSRLATERQRLLSGFTRNDVICDVFSGVGPLAISAARIVKRVYANDLNPYAIEYLERNSVLNKLERKIKVFNMDGRRFIKAIYASDKAQSITQVVMNLPNDAAEFLDAFRGIYKDRPKDGEFTLPMIHVYGFSKARDPEFDFHERIRIALLEVAVNVEMRRVRLVAPGKWMLCASFILPKSVAFAKTAVDT* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4476 609 Gene3D - 317 395 - -
Lja3g4476 609 MobiDBLite consensus disorder prediction 49 68 - -
Lja3g4476 609 Pfam Met-10+ like-protein 335 534 IPR030382 -
Lja3g4476 609 MobiDBLite consensus disorder prediction 128 149 - -
Lja3g4476 609 PANTHER TRNA METHYLTRANSFERASE 36 607 - -
Lja3g4476 609 Coils Coil 370 390 - -
Lja3g4476 609 MobiDBLite consensus disorder prediction 201 216 - -
Lja3g4476 609 CDD AdoMet_MTases 439 498 - -
Lja3g4476 609 Hamap tRNA (guanine(37)-N1)-methyltransferase [TRMT5]. 73 598 IPR025792 GO:0009019|GO:0030488
Lja3g4476 609 Gene3D Vaccinia Virus protein VP39 399 596 IPR029063 -
Lja3g4476 609 PANTHER TRNA (GUANINE(37)-N1)-METHYLTRANSFERASE 2 36 607 - -
Lja3g4476 609 MobiDBLite consensus disorder prediction 197 216 - -
Lja3g4476 609 ProSiteProfiles SAM-dependent methyltransferase TRM5/TYW2-type domain profile. 336 598 IPR030382 -
Lja3g4476 609 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 332 598 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4476 Lja-Chr3 86443308 86450911 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4476 K15429 - gmx:100793959 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4476 3 86443308 86450911 Lja3g4476 3 86443308 86450911 ECH