Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4445 ATGGCTTTGCCGGAAATTCATTCTTGGACTTTAGGGGGATTGGTTGGAGCTTTTGTTGATCTTGCTATAGCTTATTTCTTGCTATGTGGATCTGCTTTTGCTTTCTTTGCTTACAAATTGTGCATGTTTTTTGGACTTTTCTTGCCTTGCCCATGCAAGGGGAGTTTTGGGTATAGGAATAGCAATTTCTGTGTGCATAAAATGCTGTTTGAGTGGCCTTCAAGGAAGATATGCTCAATTCAAGTGATGGCTGTGAGAAGGTTTCCTTTTGATGTTTTGTGGTTGAAGGGTCATTCATGCAATGCCAATGATAAAATGGTTGCCCAGAAAATGTTTGATAATAGGCTTGTTGAATTGGAAGATGAGGCATCCTGCAGTTCATATGCAAGCCCAAGATTGGTTTCCTTAGAAAAGGAGAATGGTTATGATGCTAAGGGAAAGAGGGTCATGAGTCTGAAACGAAGATCCGGGATTCGGCGCAGGAGGAGGAGTGGTTATGATTGTGGGAAAATCTCTTCGGTTGTTCCTTCTGATAGTCTTCAATCTGATGTTGCCGTCACTTCCTGTTTGCCATGTGATGGCAGTATAATCAGAGATAGAACCAGTGAAAGAATATATCCTGCTTCAGGGAAAGAAGTTAGTGTACACTACGTTGAAGATGCCCAAAGTGGTCATGATTTGGATGAAAAGACCTGTCACAGTTATGAATTTAATGGATCAATAGTTGATAGTCCAGAACAGGACAAATATTCATCCTCATTGGAACACTACATGAGTAATATGCAAGACAATTTCCAGATTATTGGAAATGAAGGGGACCGTATCAAGATGTTGGAAAATGCACTTAAAGAAGAGAAAGCTGCCTATGCTGCTCTATACCAAGAGCTAGAGAAGGAGAGAGCTGCATCTGCTAGTGCTGCTGATGAAGCCATGGCTATGATATCGCGTCTGCAAGAGGAGAAGGCATCCATGGAAATGGAAATGAGGCAATACCAGAGGATGATAGAAGAAAGAGATGCTTATGAGGAAGAAGAGATGAATATTCTTCAAGAGATCCTTATAAGAAGGGAAAGGGAGTATCACTCTCTGGAAAAGGAACTTGAATCTTATAGGCAGACAAATTCGAATGGAAGGGATGGCAGGACGAAGTTGCAGCTCGATGGACAAAGGCTACCAATTTCAGTTGAAAGATATGAAGATCCACCACAGATTGAAAGCACCATATCAATTGTTAAGAAAGATGAAATAGTAAACATTTCATCAAATTACATGGTTGCTGAGGATTATATCAATACAGAAGATGGAGAAGAGCTGGAGAAAAACACAGAGCGCAAGGGTCAAGGGCATGAAGATCTGCATAGTTGCTTTTATGATACTGAACCTGATGTACTTGATGTCCATGTTGTTGATGACAACATAGAACTTAGGGAAGAGGAAAATGAAAAGTTACGTAGTTATTCATCTGGTACTCTTTCAAATGAACATGATGTGAGTATTGATGGTCCAGCTAGTCAGTTATCTATGTTCTCTAACTCAAGATGCAAAACTTTGCCTTCTGATTCTGGAAGTGATTCTTCATGTGCAGTTCATAATGAAAAGTTAAAGATTGACAATGAGATTGAAATTCTCGGAGAAAGGCTAAGGATGGTAAAACATGAAAAAGAAAAATTAACTTTTTTCGCGGAGAACAGAGAAAGTGAAAAAGATCGTTTGAAGCTTCTGGAGGAGATACCGAACCATGTTCAACAAATTAAACAGTTAAGGAACCCTGTACGTGGGACTTCCTTGCCCCCTTCATCAGCAAAGGCAAGCTTGAAGAAAAGTGCGTCTTGGGAGACATGTGAAAGCTGCTAA 1854 0.4018 MALPEIHSWTLGGLVGAFVDLAIAYFLLCGSAFAFFAYKLCMFFGLFLPCPCKGSFGYRNSNFCVHKMLFEWPSRKICSIQVMAVRRFPFDVLWLKGHSCNANDKMVAQKMFDNRLVELEDEASCSSYASPRLVSLEKENGYDAKGKRVMSLKRRSGIRRRRRSGYDCGKISSVVPSDSLQSDVAVTSCLPCDGSIIRDRTSERIYPASGKEVSVHYVEDAQSGHDLDEKTCHSYEFNGSIVDSPEQDKYSSSLEHYMSNMQDNFQIIGNEGDRIKMLENALKEEKAAYAALYQELEKERAASASAADEAMAMISRLQEEKASMEMEMRQYQRMIEERDAYEEEEMNILQEILIRREREYHSLEKELESYRQTNSNGRDGRTKLQLDGQRLPISVERYEDPPQIESTISIVKKDEIVNISSNYMVAEDYINTEDGEELEKNTERKGQGHEDLHSCFYDTEPDVLDVHVVDDNIELREEENEKLRSYSSGTLSNEHDVSIDGPASQLSMFSNSRCKTLPSDSGSDSSCAVHNEKLKIDNEIEILGERLRMVKHEKEKLTFFAENRESEKDRLKLLEEIPNHVQQIKQLRNPVRGTSLPPSSAKASLKKSASWETCESC* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4445 617 PANTHER BNAANNG28530D PROTEIN 6 607 - -
Lja3g4445 617 Coils Coil 307 373 - -
Lja3g4445 617 ProSiteProfiles GTD-binding domain profile. 273 371 IPR007656 -
Lja3g4445 617 PANTHER BNAANNG28530D PROTEIN 6 607 - -
Lja3g4445 617 Coils Coil 275 302 - -
Lja3g4445 617 Pfam Zein-binding 277 367 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4445 Lja-Chr3 85992915 85997477 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4445 - - gmx:100809228 764.607