Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4442 ATGTTAGGCCGTGGAGTGCATGGATATAACCCGGGATCTGCTCCCCTAGCAAATGCTGAGGTTGATTCCATGGGAGGAGTTGTTGATGGTGGAGTTGGTATTGGTTCGAAGATCTCTCCACACCGAGGAGCAGTTGAGAAGGCTCAAGCAAATCTCAGAGAGGAGTATGATGGTCGTGAAGAAAGTAGCCGAGAGCTAGAATTTCTTGAAAAAGGTGGGAATCCTCTGGAGTTGAAGGCTGGGAATGCTGCTTCAGTTAGTGTTCAGTCCACTTCACTCACTGATCAGCATCATGAGCAGTTTGTGACCAGTGAAGCAAAAGGTAGTTTTGCATTGACTGCCTCCCCGCACGGTGACTCTGTGGACAGTAGTGCTAGACCAGGGCCTCCTTTTGCTAGTGAACCTATAACTGCTGATAATCTCCTACTTTTTGATGCTGAGAATGAGTTGCCTGAAAGTGAAAAGAGGTGCTTGCGTTCAAATAGAAGGAATTATATTGCTCCATCAGAACAGTCTTCCCGAATTGATGGGAGTCAAAATGCTAAGGAGACTGAAGATTCTGCTATTTTCCGGCCATATGAACGAAGGAACAGATCCCGAACAAATCATGGTCCTCGGGGGGCTTCAAGGGAAGGGAAGGGGTTAATGTCTGATACATTTATCCAAAAGGACCACAAAGTTCCTTCTTTTACTAAGCCAAATTCTACTAGTTTTAATGGTGATACTGTTACTAAGAATCTGACAGCTAATAATTCACTGAATAATGAATTAGTTGGGGTCCAAGATCATCAATCTACTAGTGGCAGTGTTAGTGTTCCTAAAGATAAATTGGATATTACCCTGAATGGAAATTTAAGAGAAAATCATGGCACTCTACCTCCCCAAGCTGATAATGTACAAAATCCAGTTCTCATGGCTTCTGGAGAAGCTAATGTGGTTGAAGTAAGGGAGCCAGTGGCTGCTGTCGATTATGAGCCTGCACCACATGTAGCTACTACAAAACCTGAAAATGGAAGTTATTATGGTCAGCCAAATGGATTTGGTAATGTAGAAGTAGACAGGAAAAGTGTACCAAATGGAAGCCAAAATAGCATTGCTGTATTGGGCAAGAATATTGATCTGGAGTTCTGTACTCAAACCAGTTTAGATAGAGATGTAAATAAGGATAGTGATATATGTACTAATAGAAAGAATGTTGATGACACTGGAAATACCCTGGAACAAACTCTTGCATTTGACAATAAACTGAACTTTGCTGGTCGTGAAGTTATGAAAGCTAGGAATAAAATCAAAAGTGAAAATGGCGCTTCAGTTAGCAATGAACACGATGCTGGTTATTCAAATCATTCTGGTAATGGTAATATTGTCAAAGCTGCGGAAGATGTCTATACTAACTCTGTGAAGGAAACCAACTGTGAAAGACACCAGATTCCTGTGGATGTGTCAATATCAGAACCTCCTCAGATTGCACCACCAACTGAAAAGGTTTCAACTGCCACCTCTGACTATCAATCATGTTCTACATACCATATGAAGTTAGCCGAGAAGGCTCGTGAAGATTCTATTTTGGAAGAGGCTAAAATCATAGAGGCCAAGCGGAAGAAAATTGCAGAGTTATCTATTCGCTCATTACCCGCAAGGAACTACATAAAGTCACATTGGGGTTTTGTTCTTGAAGAAATGACGTGGCTGGCGAATGATTTTGCGCAGGAGCGTCTTTGGAAGATAACTGCTGCAGCACAATTGGGTCATCGAGTGGCTTTTACTTGTCGGCAAAGAGTTGAAAAACTAAACAAACATCTGGGGGTAAAAACATTGTCTCACAGAATTTCAAAGGCTGTCATGCAGTTTTGGCATTCAGCTGAGCTACTTCTAGACAATGATGATCCAGCTATTAACTCTATTGTTGGTTGCGTTGAATCTGCGAAAGTTGATGCAAATGAAGCTTCTAGGGACCAGAAAGGAAATTCCTACGTGGATACAAGCAACTTTTTGGAAGGACTAAATCCCATAAAAAACTCAGCACTTAAAGTGCACGCATATGCTATAAGATTATTAAAGGCTAGTAGGTCTCAGGGAATTTCCTCGCAAGCAGAAGCACCAACAACACCTGAAATGATATTTGACTCAGGCATTGTGGACATATCATGGAAGGAGCATCTTACTGAAGAAAGCCTTTTCTATGAAGTCCCCCCTACTGCGATGGAAAAATACAGAATATCTGTTGAATCTCATTTCTTTCAGTTTGAGAAAAATGGGAGTGCCATTCAAGGTGAAACATCTGTATATGATACTGCGGCAGAGTTTGGGTCTGAAGAGATTGCATATGATGAGGAAGAAGGAGAATCCAACACTTATTACTTGCCTAGTGTCTACAAGGGTAGCATATCATCAAAATCTGTGCACAAGAAACACAAAAACTGGAAGTCTTACACTCCTGGGTCTGGTGATGCTGGGACTGATTTTCCTTATGTACACTATTCAACTGGAACTAAACCGTCCATGCTATTTGGAAAAAGACCTGCTAGTTCAAATGTTGGGTCAGTACCAACTAAGCGGATGCGTACAGCTACTAGGCATAGAGTTGTAAGTCCTTTTACAGTCACCACTGGGACAATACAGGCTCAAGATAGGGCAGATGCTTCAAGTGGAGATAACAATTCCTTCCATGATGACCACATTGACCAGAGTACTTTACATGTTGGACCCCTGATCCAGAAAAGTATGGAGGTGGAGTCAGTTACGGACTTTGAAAAACAATTAGCTTATGACTGTGCTGAAACATCTATTAAAACAAAGAAAAAGAAGAAGGCAATGACTCTGGGTTCTGCCTATGAACAGGGATGGAAGTTGGATTCTAGTGTTCAAAATGAACAGAGGGATCATTCGAGTAAGAGACTGAATAGTCATCACTTTGAATCTAATGGGAATTGTGGTTTGTATGGGCAACATAATGTGAAGAAGCCAAAGATAACGAAGCAATCACTTGATCATGCTTTAGACAATAATTCTCCGATGACTAATTCTGTTCCTTCCCCAGCTGCTTCACAAATGAGTAACATGTCCAATCCTAATAAATTTATTAAAATTATCAGTGGGCGAGAAAGGGGCCGGAAAGCAAAAGCACTGAAGATTTCTGCTGGACAGCATGGTTCTGGAAGTCCTTGGTCACTATTTGAAGATCAGGCTCTTGTTGTCCTGGTGCATGATATGGGTCCAAACTGGGAGCTTGTAAGTGATGCTATCAACAGTACTCTCCAAATCAAGTGTATCTTTCGGAAACCAAATGAGTGCAAGGAGCGTCATAAGATTTTAATGGATGGAAGTGCTGGGGATGGTGCAGATAGCGCTGAAGATTCTGGGTCTTCACAGTCTTATCCATCTACATTGCCTGGAATTCCTAAGGGTAGTGCCAGGCAGTTGTTTCAACGTTTGCAAGGACCAATGGAGGAAGATACTCTGAAGTCTCATTTTGAGAAAATTATAAAGATTGGGCAGAAACAACATTACCTTAGGAATCAGATTGATAACCAGGATTTAAAACATTTAGTACCTATCCATAATTCACATGTCATTGCTCTTTCCCAAGTCTGCCCCAACAACCTGAGTGGAGGTATTTTAACGCCGCTTGATTTTTGTGAAACAAACACATCGAACCCAGATGTCCCAGCCCTTGGGTATCATGGTCTTCATACTGGCAGTTTGGCATCATCAAATCAAGGTTCTGTACCATCAGTGCTTCCTACATCTGGGGTGAATACCTCACTGCCAGGGTCTTCTGGTATGGTTCTTAATAATAACTTCTCACCATCTTCTGGTCCAACTGCAGCCTCTGTCAGATATGGGGTTCCAAGAAGTTCACCTTTATCGGTGGATGAACAGCAAAAATTACAACAATACAATCAAATGTTATCTGGGAGAAACATTCAGCAATCTAGCATGTCAGTCCCGGGAACTCTTCCTGGAAATGATCATGGTGTTTGCATGATGCCTGGTGGAGGTGCTATGGGCTTAATGGGCGGAATTAACAGAAGCATGGCAATGCCCAGGCCAGGGTTTCAAGGAATGTCATCACCATCTATGCTTAATTCTGGAAGTATGGTTTCCTCTAGTATAAACATGCGCTCTGGAGTTGGTTCTGGACAAGGCAACTCAATGTCGAGACCTCATGACCCTCTTATGAGGCCTGGCCATAACCCTGAACATCAAAGGCAAATGGTAGCTCCACAGCATCAGACGCAAGTCACCCAGGGGAACAATAAAAGCAATCCTGCTCTCTGCGGGATTAGTTCTGCCTTCAATAATCAGACAACTCCACCACCTGTTCAGCCTTACCCAGGACATGCCCAGCAGCAGCCCCACCGCAGCAATCCTCGTCCTCCTTTTCAAGGTCCAAATCATGCGACAAATTCACAGCAGCAAGCATATGCAGTCCGGTTGGCAAAGGAAAGGCAACTGCTGCAACAGCAGAAATATTTGCAGCAGCAGCAGCAGCAGATTGCTGCATCAAATGCATTGATGCCTCATGTCCAGGCTCAATCTCAACTTCCCATATCATCATCACCTTTGCAAAATAGTTCCCAGGTTCAACCTCCAAATTCATCTCAGCATGAACCTCTTTCACCTGCAACTGCATCATCAGCCTTGGGTCCCATGTCATCTCAGCATCAACAGCACAAGCTTCACCAGCTACAACATGGGTTAAGCAGGAATCCCGTTGCTAATGGGTTGACTAATCAAGCCGGAAAGCAACGGCAACGACAGCCATCACAGCAGCAGCAGCAATATCAACAGTCTGGTAGGCAACATCCTAATCAGCGGCATAATGTACCACCTCAACAGCAGGCTAAACTTCTAAAGGGTATAGGAAGAGGAAACATGTTGGTTCGTCAGAACCTCTCTGCCGATCCTTCTCATCTAAATGGGCTCTCGTTGCCTGCAGGAGGCCAAACTGGTGAAAAGGGGGACCAAATCATGCACATGATACAAGGTCAAAGTTTTTATCCTGGATCTGTTTTGAACCCAAGTCAACCATCACAGCCATCGGGTCATGCCCATTCTGTAAACCATTTGCAGTTGCAGCAGAAACTATGTTCTGGGTCCCCAACCACTTCACCAAAGCTACTTCAGATTTCTTCTGATGCTAGTGCTCAAGTACAGGTTTCACCAGTTTCATCAGGTCAAATGTTATCACCTACCCAGCCAGCTGTGATTGTTTCAAACCACCACCAGTTGCAGCTACAGTCTAACAAAATTAATCAAACTCAATCAAATATTCAGAGAATGTTGCCACAAAACTGCCAGGTGCATTCTGAGTCATCAAGTAAGTCTCAATCTGATCCAACTCAAGTTGATCAAACGCCTGAAAACAGTGCTTCTAAGATTAGTACAAGTTCTACAATGAGTCAGGGTTATATGGATTCATCGAGTCTGGTACCAGCTGTTACTACTGTTTCTTCTCAGTGGAAAACATCAGAAACACCATATGATTCCAATATTGACAATCAAGCCCCTAAAGTGAGCTCCTTGGGTAGTGCACCTGTTGGCAATTCTACTGGAAGTGAACAGCCCACAGTTAGTCAAGGGATTGACCCAAGATTAGTTTGCTCGACATCTAATGCACATAATAATGGGGCACAGCGGCAGCAGCAGCAGCAGCAGCCACAGCCTCTTCAACAGTCATCGCCCCAAGAGCAGCATAAGCAGCAGCAGCAACAGGAGCATGAACTACATTCTCCCACATCTCTTGCTTCACAACATCAACCTCAGCAACACATGAAGCATCCACAATCAGGGCAGAGCAGTTTGTTTATTCACTCACCTAATTCTAAAGAGGAATGA 5841 0.4328 MLGRGVHGYNPGSAPLANAEVDSMGGVVDGGVGIGSKISPHRGAVEKAQANLREEYDGREESSRELEFLEKGGNPLELKAGNAASVSVQSTSLTDQHHEQFVTSEAKGSFALTASPHGDSVDSSARPGPPFASEPITADNLLLFDAENELPESEKRCLRSNRRNYIAPSEQSSRIDGSQNAKETEDSAIFRPYERRNRSRTNHGPRGASREGKGLMSDTFIQKDHKVPSFTKPNSTSFNGDTVTKNLTANNSLNNELVGVQDHQSTSGSVSVPKDKLDITLNGNLRENHGTLPPQADNVQNPVLMASGEANVVEVREPVAAVDYEPAPHVATTKPENGSYYGQPNGFGNVEVDRKSVPNGSQNSIAVLGKNIDLEFCTQTSLDRDVNKDSDICTNRKNVDDTGNTLEQTLAFDNKLNFAGREVMKARNKIKSENGASVSNEHDAGYSNHSGNGNIVKAAEDVYTNSVKETNCERHQIPVDVSISEPPQIAPPTEKVSTATSDYQSCSTYHMKLAEKAREDSILEEAKIIEAKRKKIAELSIRSLPARNYIKSHWGFVLEEMTWLANDFAQERLWKITAAAQLGHRVAFTCRQRVEKLNKHLGVKTLSHRISKAVMQFWHSAELLLDNDDPAINSIVGCVESAKVDANEASRDQKGNSYVDTSNFLEGLNPIKNSALKVHAYAIRLLKASRSQGISSQAEAPTTPEMIFDSGIVDISWKEHLTEESLFYEVPPTAMEKYRISVESHFFQFEKNGSAIQGETSVYDTAAEFGSEEIAYDEEEGESNTYYLPSVYKGSISSKSVHKKHKNWKSYTPGSGDAGTDFPYVHYSTGTKPSMLFGKRPASSNVGSVPTKRMRTATRHRVVSPFTVTTGTIQAQDRADASSGDNNSFHDDHIDQSTLHVGPLIQKSMEVESVTDFEKQLAYDCAETSIKTKKKKKAMTLGSAYEQGWKLDSSVQNEQRDHSSKRLNSHHFESNGNCGLYGQHNVKKPKITKQSLDHALDNNSPMTNSVPSPAASQMSNMSNPNKFIKIISGRERGRKAKALKISAGQHGSGSPWSLFEDQALVVLVHDMGPNWELVSDAINSTLQIKCIFRKPNECKERHKILMDGSAGDGADSAEDSGSSQSYPSTLPGIPKGSARQLFQRLQGPMEEDTLKSHFEKIIKIGQKQHYLRNQIDNQDLKHLVPIHNSHVIALSQVCPNNLSGGILTPLDFCETNTSNPDVPALGYHGLHTGSLASSNQGSVPSVLPTSGVNTSLPGSSGMVLNNNFSPSSGPTAASVRYGVPRSSPLSVDEQQKLQQYNQMLSGRNIQQSSMSVPGTLPGNDHGVCMMPGGGAMGLMGGINRSMAMPRPGFQGMSSPSMLNSGSMVSSSINMRSGVGSGQGNSMSRPHDPLMRPGHNPEHQRQMVAPQHQTQVTQGNNKSNPALCGISSAFNNQTTPPPVQPYPGHAQQQPHRSNPRPPFQGPNHATNSQQQAYAVRLAKERQLLQQQKYLQQQQQQIAASNALMPHVQAQSQLPISSSPLQNSSQVQPPNSSQHEPLSPATASSALGPMSSQHQQHKLHQLQHGLSRNPVANGLTNQAGKQRQRQPSQQQQQYQQSGRQHPNQRHNVPPQQQAKLLKGIGRGNMLVRQNLSADPSHLNGLSLPAGGQTGEKGDQIMHMIQGQSFYPGSVLNPSQPSQPSGHAHSVNHLQLQQKLCSGSPTTSPKLLQISSDASAQVQVSPVSSGQMLSPTQPAVIVSNHHQLQLQSNKINQTQSNIQRMLPQNCQVHSESSSKSQSDPTQVDQTPENSASKISTSSTMSQGYMDSSSLVPAVTTVSSQWKTSETPYDSNIDNQAPKVSSLGSAPVGNSTGSEQPTVSQGIDPRLVCSTSNAHNNGAQRQQQQQQPQPLQQSSPQEQHKQQQQQEHELHSPTSLASQHQPQQHMKHPQSGQSSLFIHSPNSKEE* 1947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4442 1946 Pfam HSA domain 551 587 IPR014012 -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 959 981 - -
Lja3g4442 1946 PANTHER CHROMATIN MODIFICATION-RELATED PROTEIN EAF1 A-RELATED 24 1938 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 164 185 - -
Lja3g4442 1946 ProSiteProfiles Myb-like domain profile. 1054 1106 IPR001005 -
Lja3g4442 1946 SMART bromneu2 542 608 IPR014012 -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 1373 1387 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 112 134 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 1825 1901 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 1405 1438 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 161 216 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 1000 1021 - -
Lja3g4442 1946 Pfam Myb-like DNA-binding domain 1056 1104 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 1116 1131 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 1908 1940 - -
Lja3g4442 1946 CDD SANT 1055 1101 IPR001005 -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 1825 1946 - -
Lja3g4442 1946 PANTHER CHROMATIN MODIFICATION-RELATED PROTEIN EAF1 A-RELATED 24 1938 IPR044798 GO:0035267
Lja3g4442 1946 MobiDBLite consensus disorder prediction 1107 1134 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 1511 1613 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 1667 1688 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 1766 1806 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 433 452 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 1373 1472 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 836 856 - -
Lja3g4442 1946 ProSiteProfiles HSA domain profile. 541 615 IPR014012 -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 187 207 - -
Lja3g4442 1946 MobiDBLite consensus disorder prediction 1449 1472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4442 Lja-Chr3 85956623 85972023 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4442 - - gmx:100811365 2560.79