Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4426 ATGTATGCTGATCGGGTGGAGAGTGGAGCAAGGAGGTCCGTCAAGGAACGACTGAATGGGACTGATGCCAGTGGCTCTACTCGCCAGCATCGCCAAATCACCGGCAAGAGATCGAGGCAAGATGACAAGTGGGAACATGATCTATATGACAATGATGAACCCCGGATCACTAGTATGGATCGCAAAGTTACTGCCCAAGATCTTCGTCATAAGCTTCAAAAGAAAGGTCTTCAACCAGCAGCTCCAAGTGGAAAGAGTTCTGTTCCAAACATGCGGGATCTCCGTGAAAGGCTATCAGGGACAATGACTGCACAACCTAAAAATTCTGACCCTCCAAAGTCAAAAGTGATGGGTAAACCAAGCAATAAAAGCGTCGGTGTCGAGGCTCCTGCAGCAAAGATTAAAAGATCCACTAACCCTGCTCCTAAAACTTTGGCACGAAAGGCTGAGACTTCAGTGGATGAATTTTTGCAGTCGTTGGGTCTCGAAAAGTATCTCATATCTTTCCAGGCTGAAGAAGTTGATATGACAGCTCTCAATCATATGACCGATGAAGATCTCAAAGCTATGGGTATACCAATGGGGCCAAGAAAGAAGATACTTTTAGCGTTGGAGTCTAAAGTCTGA 627 0.4593 MYADRVESGARRSVKERLNGTDASGSTRQHRQITGKRSRQDDKWEHDLYDNDEPRITSMDRKVTAQDLRHKLQKKGLQPAAPSGKSSVPNMRDLRERLSGTMTAQPKNSDPPKSKVMGKPSNKSVGVEAPAAKIKRSTNPAPKTLARKAETSVDEFLQSLGLEKYLISFQAEEVDMTALNHMTDEDLKAMGIPMGPRKKILLALESKV* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4426 208 PANTHER OSJNBA0060P14.15 PROTEIN 1 116 - -
Lja3g4426 208 PANTHER OSJNBA0060P14.15 PROTEIN 130 195 - -
Lja3g4426 208 SUPERFAMILY SAM/Pointed domain 150 205 IPR013761 -
Lja3g4426 208 Gene3D - 150 208 IPR013761 -
Lja3g4426 208 MobiDBLite consensus disorder prediction 1 144 - -
Lja3g4426 208 Pfam SAM domain (Sterile alpha motif) 151 205 IPR001660 GO:0005515
Lja3g4426 208 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 116 - -
Lja3g4426 208 MobiDBLite consensus disorder prediction 34 74 - -
Lja3g4426 208 ProSiteProfiles SAM domain profile. 148 208 IPR001660 GO:0005515
Lja3g4426 208 SMART SAM_4 145 208 IPR001660 GO:0005515
Lja3g4426 208 CDD SAM_superfamily 152 205 - -
Lja3g4426 208 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 130 195 - -
Lja3g4426 208 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4426 Lja-Chr3 85613507 85621083 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4426 39 207 Glycosyltransferase AT3G07170 56.471 8.42e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4426 - - gmx:100527300 308.145