Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4414 ATGGTGGAAGTTGAAGAGATTGAGCTGGATTTGGGATTGTCCATAGGCGGAACTTTCAGAAAACCTATAGATAATCCCAATTCCAAACCGGTTTTGTTTGATTTGGATCCACGCTACGATCATCGCGTGGATTCAGCTCATGCAAAACCGGTTTTGCGTGAGGCTGCGTTGCGGAGGATGGAGGAGGTGAAGAAGAAGCTAGAGCAGAAGAGGGGAGTTGGAGAGTCCGAACCGGAATGCGAACCGGCGTGTAAGAAGGGAAAGACAACCGGTTTTCTCGACGGCGGCGTGACGGTTTCATGGACGACGCCGTTTTGCGTGCAGCAGCAGCCGTACGCGGCGACGGTGCAGTACGTGCCGTTAAGTAACGGCTTGGCGTTGCCGTGTTGGGTTGCGAACGAGAAGAATGTGGGTGGAGGGGTTGACGGCGTTAAAGGTGGAGATGGGAAAGCGAAGTCTAATGGGTCTTCTAGGTGCAGTTCCTCTGCGGTTTCGGATTACCGATGTTCTTCTCGTGAAGATGGTGGAAGCACAGACAGCCACAGCCATTCAGCTAATTCTTTGGCAGAACCAACTCAATTGAACAGTTCCAAGGAAGCTAACATCAGAAACCAACCTGAAGAAAGTGATTCATCTCCTCCGGTAAAATCCCAACAATATGGCAACAATGTACAAGAAGAAAAGCAATCTGTGAGGCAAACTCAATCAAACGTCGTCACGCGACCCGAGCCAGTGAAACTCAGGGAAGAAAATGCAGAAAACAGAAAGACACTTTCAATGCCTAATAGTAAGCCTCTTTCTAATGAAAATTCAAGCAATGGCACCTTGAAGGAGAGCAAAGATGAGATATTGGGAAAGCCACCATTACCAAAGCCTCTGTCTCAGGCTTCTTCCCTTCCTCAAATGCCTTATGTATCAACTAAAGGGAATGGACCAAATGGGAGAACAGTTAATGGGTTTCTATACAGATATACAAATTCTGAAGTTAGCATTGTTTGTGTCTGCCATGGAAGCACATTTTCACCTGCTGAGTTTGTGCAGCATGCAGGGGGCACAGACATCACTCACCCTCTAAAACACATTACTGTAATTCCTTCTGCTTTTGGGTGA 1110 0.4748 MVEVEEIELDLGLSIGGTFRKPIDNPNSKPVLFDLDPRYDHRVDSAHAKPVLREAALRRMEEVKKKLEQKRGVGESEPECEPACKKGKTTGFLDGGVTVSWTTPFCVQQQPYAATVQYVPLSNGLALPCWVANEKNVGGGVDGVKGGDGKAKSNGSSRCSSSAVSDYRCSSREDGGSTDSHSHSANSLAEPTQLNSSKEANIRNQPEESDSSPPVKSQQYGNNVQEEKQSVRQTQSNVVTRPEPVKLREENAENRKTLSMPNSKPLSNENSSNGTLKESKDEILGKPPLPKPLSQASSLPQMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFVQHAGGTDITHPLKHITVIPSAFG* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4414 369 Coils Coil 53 73 - -
Lja3g4414 369 MobiDBLite consensus disorder prediction 180 241 - -
Lja3g4414 369 MobiDBLite consensus disorder prediction 256 274 - -
Lja3g4414 369 PANTHER NUCLEAR TRANSPORT FACTOR 2/RNA RECOGNITION MOTIF PROTEIN 2 368 - -
Lja3g4414 369 Pfam Tify domain binding domain 329 362 IPR032308 -
Lja3g4414 369 PANTHER AFP HOMOLOG 2 2 368 IPR031307 GO:0007165
Lja3g4414 369 MobiDBLite consensus disorder prediction 144 313 - -
Lja3g4414 369 MobiDBLite consensus disorder prediction 295 313 - -
Lja3g4414 369 MobiDBLite consensus disorder prediction 153 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4414 Lja-Chr3 85454089 85456190 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4414 - - lja:Lj3g3v0719960.1 739.569