Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4384 ATGTCTCGTGCTCCCAACTATGAGTTTCAGGAATGGTGGAACAAGCAGAGAGACAAGGAGAATCTCGACCTCTTGGAAGTTAAGGCGGACCAAGCCTCCTCCTCCCCTTTCACCGCCGTCGATGTCGGAGACATCGGCGGCGGAGCTGCTGGTGGTGGTCGGTCAGATCCGTCGGTGGAGAAAGATCGTGCACGCAGCGCGCGGCAGTTGAGGTGGGTTTGCTTGTTGAGGTTCCAGCAAATTGCGTCGAATCTCTCATCGATTTCCAACGGTTTCCTCTTCTTCCTCCGCGCCGCGAACCGCCGGATCTCGTCGCATTCGCTGGCGGATTCAGGGACGTCGCGGCTCTACCGTGCGATCAGGGTGTTTCTGATTGTGGTGATTGGTTTGTTAGGGTTTGAGCTTGTGGCGTACTTCAAAGGGTGGCATTTTCGGCCGCCGTCGGTGGGGTCTGCGGAGGTGTTGGGAATGGTGGGGGTGATTTATGCGCGGTGGTTGGAGATTCGGGCGAGTTACTTGGCGCCGCCGCTGCAGAGTTTGGCGAATATGTGCATTGCGTTGTTCATTGTGCAGTCTGTGGATAGGGTGGTTTTGATCTTGGGGTGTTTTTGGATCAAGTTTAGGAGAATTAGGCCTGTTGCTGAAGTGGACTATGAGGGTGATGTTGAGAGTGTGGAGGATTACCCTATGGTGTTGGTTCAGATTCCCATGTGCAATGAAAGGGAGGTTTACCAGCAATCTATTGGAGCAGTTTGTATCATGGATTGGCCAAAGGAGAGAATGCTTGTACAGGTTCTTGATGATTCTGATGAAGTAGATACCCAACAGCTCATCAAGGCAGAAGTGAATAAATGGCAACAAAGGGGTGTTCGGATAATTTATAGACATAGGCTTATACGTACAGGCTACAAGGCAGGGAATCTTAAATCCGCAATGGGCTGTGATTATGTTAAGGATTATGAGTTTGTGGCAATATTTGATGCTGATTTTCAACCTACACCAGATTTCTTGAAGAAGACAATACCTTATTTCAAGGGAAAGGATGATGTGGCATTAGTCCAGACAAGATGGGCATTTGTAAACAAGGATGAGAACTTGCTTACAAGATTGCAGAACATTAATTTATCTTTCCACTTTGAGGTTGAACAGCAGGTGAATAGTGTCTTCATTAACTTCTTTGGTTTTAATGGAACTGCTGGTGTCTGGAGAATAAAGGCCCTTGAGGAGAGTGGTGGCTGGTTGGAGCGAACAACTGTGGAGGACATGGATATTGCTGTTCGTGCTCATCTCTGTGGATGGAAGTTCATATTTCTCAATGATGTTAAGTGCCTTTGTGAACTTCCAGAGACATATGAAGCATATAAGAAACAACAACACCGCTGGCATTCTGGTCCAATGCAGTTGTTCCGTTTGTGTTTTGTTGATATACTTCGTTCAAAGGTTAGTTGGGGAAAGAAGGCCAATTTGATATTTCTGTTCTTCCTCCTGAGAAAGCTTATCCTGCCATTTTATTCATTCACCCTCTTCTGCATCATTCTTCCATTGACTATGTTCCTTCCAGAATCTGAGCTCCCAGCCTGGGTTGTTTGCTACATTCCCGGAATCATGTCTATCCTAAGTGTTCTTCCGGCCCCTCGGTCATTTCCATTTATAGTGCCTTACCTTCTATTTGAGAACACTATGTCAGTAACTAAATTTAATGCCATGATATCTGGATTATTTCGCTTCGGAAGTTCTTACGAGTGGGTGGTCACGAAAAAATTGGGAAGATCATCAGAGACAGATTTGGTTGCCTATGAGAAGGAATCTGATCCTCTAATGCGATCTACTAGTCTTCATAGATCATCCTCAGACTCCGGTATTGAAGAACTAAGTAAACTTGAATTGTCAAAGAAAATAGTGAAGACCAAGAGAAATCGTCTCTACAGGAAGGAACTTGCTCTTGCATTTATATTGCTAACTGCCTCAGTTAGAAGCTTATTATCTGCCCAAGGAATTCACTTCTACTTCCTATTGTTTCAAGGGGTAAGCTTTCTGGTTGTTGGTCTTGATTTGATAGGAGAGCAGGTTAGTTGA 2076 0.4547 MSRAPNYEFQEWWNKQRDKENLDLLEVKADQASSSPFTAVDVGDIGGGAAGGGRSDPSVEKDRARSARQLRWVCLLRFQQIASNLSSISNGFLFFLRAANRRISSHSLADSGTSRLYRAIRVFLIVVIGLLGFELVAYFKGWHFRPPSVGSAEVLGMVGVIYARWLEIRASYLAPPLQSLANMCIALFIVQSVDRVVLILGCFWIKFRRIRPVAEVDYEGDVESVEDYPMVLVQIPMCNEREVYQQSIGAVCIMDWPKERMLVQVLDDSDEVDTQQLIKAEVNKWQQRGVRIIYRHRLIRTGYKAGNLKSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTIPYFKGKDDVALVQTRWAFVNKDENLLTRLQNINLSFHFEVEQQVNSVFINFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLCGWKFIFLNDVKCLCELPETYEAYKKQQHRWHSGPMQLFRLCFVDILRSKVSWGKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPESELPAWVVCYIPGIMSILSVLPAPRSFPFIVPYLLFENTMSVTKFNAMISGLFRFGSSYEWVVTKKLGRSSETDLVAYEKESDPLMRSTSLHRSSSDSGIEELSKLELSKKIVKTKRNRLYRKELALAFILLTASVRSLLSAQGIHFYFLLFQGVSFLVVGLDLIGEQVS* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4384 691 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 221 446 IPR029044 -
Lja3g4384 691 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 25 690 - -
Lja3g4384 691 Pfam Glycosyl transferase family group 2 323 527 IPR001173 -
Lja3g4384 691 PANTHER - 25 690 - -
Lja3g4384 691 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 507 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4384 Lja-Chr3 85118996 85125436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4384 1 691 Miscellaneous Gene Families AT3G07330 75.000 0.0 1061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4384 - - gmx:100801779 1151.73