Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3843 ATGTCAGAAGAAGACGATAGAGGTTGGGATTTCCACCTCCGAACTCTTTCCATCAGTGCCAGAGACTCCAACACCGCCAACGATCCCGCTTCCGATCCCTCTCTTCTTCAATCCGTGAAGAAGCTTCATGGATTGTGCAAGGCTGAGAATTCTGAGGACTTGGTAGCTAGGGTTTATCCTCAGATTAATAAGATTTTTCAGCGTGCCGTGGCTTCGCTTTCGCAATCTCAAACCTCTAATGGACTTCTTTTACTCGCAATTCTTCAGTTTTACCTTGACTTTGGGGATGTTGTTCTACATGATGCTGATCCTAGTCTCAGGACTTTTTTTCGTTCCTGTTTGAGCAGGGAATTTGCAGATCCTGTTGTCGCAGAAGCAATGCTTGAATTCCTCATTACTAACAAGAAGAAGCTTTTAACTTCCTTCCCTAACTTGTTGCCTCAGTTTTTTCCATTGTTGTTAAAAATGATTGCTTGGAATGGTGAAAGATTAGAGAAACTATTTATGAAAGCCTTTCCGGGATTGATATCACCTGGGTCATTTATTCCATTATTTCCATATTTACTAGACTTGCCGATTTTGGCAGTGGCATTGGAAAAGGTGGAGAAAAGCTCAGGACCACTAATTGGAAGCAGTATAGCTTCAATTCAGAAAAATACTGCTCCTAAGATGCTACTTGCCCTTATGGATGAAGCATATACTGGTTCAACTATAGAAGATGGCGGAGGAGATTCTGAATCTGAGGATAGCAGTGCAATCGATGTATCTGATCCTATATTCCTGGAGCTTTTAAAGGATGAAAATGATGGTATCGCTGAACGTCCCTGGTCATCTCCGATGATGACCACAATATTGCAGGCCGCAGTCAATAGTCCTTACTCTGACAGACTGAAATCAGTACTCAGCATGGCACCTCATCTTCTTGATGTGTACTTCTCCATAGCATTGCACGATGTCAATGACTCTTTGATCTGTGCATTGATTCCCCTGCTTATGTCAAGATATTCTACAATATTTCCAGACAAAATATTTTCTTATGAGGTTCGTAAGCGGCTTTTGGAGTTTATGCTCTCTTCATTTCAACGCTCCCCAAAATTCATTGCTATTTTGAAGAAACCTATAATGGACAGACTTGGAGAATATGACAGCCCAGACAAGACAGAATTGGCATTGCAATTATGTTGGGCCATTGGAGAGCATGGTGGTGGTGGTGGATCTCACAAAGATGAAGCCCGTGAGCTTTTTGAGAGTTTAGAACTACTTCTGTATGAAAACCTCTCCTCAAGTCGTCTGGGCATGACACTGGAGGTATTTCTTAGTTCTGATAAGGATACCTATAGAAGGTCATCACAGTCCAGGCTTTTATGTTTCGTTGTGACAGCCATTGCGAAACTTGCTACACATCATCGAGAATTACTCCCAAGAGCACGTGTAGCCTTGGGCAAGGTGGCACGGTCTCGAATTTCAGATATTAGGGTATGGAGGCGTGCATGTGATTACCTGGGTTTGATGAAAGACCCTGCTATATGTTCATCCATATTGGGGCCTTCAAGATCTTCACAAGGCACTACACAGAAAATTGGCAGCATGAACTGGAGTGAAGGTGCAACAAAGATGATTGCACATATTCCATTTTACATTCTAGGAGAACAAGAAGGACCACCTTTTCATGATTTCTCTTTCTCAGATATCCTCTCAAGATGA 1704 0.4231 MSEEDDRGWDFHLRTLSISARDSNTANDPASDPSLLQSVKKLHGLCKAENSEDLVARVYPQINKIFQRAVASLSQSQTSNGLLLLAILQFYLDFGDVVLHDADPSLRTFFRSCLSREFADPVVAEAMLEFLITNKKKLLTSFPNLLPQFFPLLLKMIAWNGERLEKLFMKAFPGLISPGSFIPLFPYLLDLPILAVALEKVEKSSGPLIGSSIASIQKNTAPKMLLALMDEAYTGSTIEDGGGDSESEDSSAIDVSDPIFLELLKDENDGIAERPWSSPMMTTILQAAVNSPYSDRLKSVLSMAPHLLDVYFSIALHDVNDSLICALIPLLMSRYSTIFPDKIFSYEVRKRLLEFMLSSFQRSPKFIAILKKPIMDRLGEYDSPDKTELALQLCWAIGEHGGGGGSHKDEARELFESLELLLYENLSSSRLGMTLEVFLSSDKDTYRRSSQSRLLCFVVTAIAKLATHHRELLPRARVALGKVARSRISDIRVWRRACDYLGLMKDPAICSSILGPSRSSQGTTQKIGSMNWSEGATKMIAHIPFYILGEQEGPPFHDFSFSDILSR* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3843 567 SUPERFAMILY ARM repeat 84 504 IPR016024 -
Lja3g3843 567 Pfam AP-5 complex subunit, vesicle trafficking 31 155 IPR028222 GO:0044599
Lja3g3843 567 PANTHER AP-5 COMPLEX SUBUNIT ZETA-1 1 566 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3843 K19025 - gmx:100796067 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3843 3 75689796 75700259 Lja3g3843 3 75689796 75700259 ECH