Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3841 ATGGCGTCTCGCACGATCCTCGAAGCAATGAAGAACAAACGCTCCTTCTTGTTCCCCTCATCTCCTCGCTTCTCCATTTTCTCTACTCGACTCGGTAGCACGCTGGTTGTGGCGGAGCACGACGGTGGTGCCATCAGAGCTCCTTCTCTCTCTGCGCTCACGGCCACCACGTGTCTTCCTGATAGCGGCTCCTCCGTTTCTCTCCTCTTGGCTGGCTCTGGTCCTTCTCTCCATCAAGCTGCTTCACATGCTGCTTCCTGCCACCCTTCAATTTCTCAGGTGCTGGTGGCAGATTCGGATACGTTCAAGAGCCCTTTGGCAGAACCCTGGGCTAAACTGGTCCATATGGTTCAGCAGAGAGGTGGTTACTCTCATATAATTGCTGCTTCAAGTTCTTTTGGGAAAAATGTCATGCCTCGCGCAGCTGCCCTGTTAGATGTTTCTCCAGTTACTGATGTTACTGGGATTTCTGATTCTCATACTTTTGTAAGGCCTATATATGCTGGAAATGCGCTTTGTACTGTGCGATATACTGGTGCCGGTCCTTGTATATTAACTATAAGAGCTACATCTTTTCCTGCTCCCCAGAAGTCAGTTGACTCAAAATCTAATGAGGCTTCAATATCTCAGGTTGACCTTTCAACCTTCGATGAAGATTTGGGCAAGTCTCGATATATATCTCAAACTACTCAGGAGGACGAACGGCCAGATCTTGGGAATGCAAGAATTGTAGTTTCTGGTGGTCGAGCGCTAAAGAATGCTGAGAACTTTAAATTGATAGAAAATCTTGCCGAGAAACTGGGTGCTGCTGTTGGTGCCACTCGTGCTGCTGTAGATGCAGGATTTGTTCCTAATGAACTCCAGGTTGGGCAAACTGGAAAGATTGTTGCTCCCGAACTCTACATGGCTTTTGGTGTATCCGGAGCTATTCAACACATCGCAGGAATGAGGGATTCCAAGGTCATTGTTGCTGTGAACAATGATGCCGATGCTCCTATATTTCAGGTTGCTGATTATGGACTTGTAGGGGATCTATTTGAGGTGATACCAGAGTTGCTGGAGAAGCTTCCCGAGAAAAAATAA 1083 0.4746 MASRTILEAMKNKRSFLFPSSPRFSIFSTRLGSTLVVAEHDGGAIRAPSLSALTATTCLPDSGSSVSLLLAGSGPSLHQAASHAASCHPSISQVLVADSDTFKSPLAEPWAKLVHMVQQRGGYSHIIAASSSFGKNVMPRAAALLDVSPVTDVTGISDSHTFVRPIYAGNALCTVRYTGAGPCILTIRATSFPAPQKSVDSKSNEASISQVDLSTFDEDLGKSRYISQTTQEDERPDLGNARIVVSGGRALKNAENFKLIENLAEKLGAAVGATRAAVDAGFVPNELQVGQTGKIVAPELYMAFGVSGAIQHIAGMRDSKVIVAVNNDADAPIFQVADYGLVGDLFEVIPELLEKLPEKK* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3841 360 SUPERFAMILY DHS-like NAD/FAD-binding domain 236 356 IPR029035 -
Lja3g3841 360 PANTHER ELECTRON TRANSFER FLAVOPROTEIN SUBUNIT ALPHA, MITOCHONDRIAL 23 358 - -
Lja3g3841 360 PIRSF Electra_flavoP_a 30 360 IPR001308 GO:0009055|GO:0050660
Lja3g3841 360 Pfam Electron transfer flavoprotein FAD-binding domain 237 317 IPR014731 -
Lja3g3841 360 Pfam Electron transfer flavoprotein domain 34 206 IPR014730 -
Lja3g3841 360 Gene3D HUPs 33 232 IPR014729 -
Lja3g3841 360 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 33 209 - -
Lja3g3841 360 SMART ETF_2 34 220 IPR014730 -
Lja3g3841 360 CDD ETF_alpha 33 212 IPR033947 -
Lja3g3841 360 ProSitePatterns Electron transfer flavoprotein alpha-subunit signature. 300 326 IPR018206 -
Lja3g3841 360 Gene3D - 233 359 - -
Lja3g3841 360 PANTHER ELECTRON TRANSFER FLAVOPROTEIN ALPHA 23 358 IPR001308 GO:0009055|GO:0050660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3841 K03522 - gmx:100793964 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3841 3 75679362 75685604 Lja3g3841 3 75679362 75685604 ECH