Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3837 ATGATTTCTTCTAGCAAAATCAAATCCGTTGATTTCTACAGGAAAATCCCTAGAGATTTGACGGAGGCGTCGTTATCCGGAGCGGGATTATCCATTGTGGCAGCTCTCTCAATGTTGTTCTTGTTTGGAATGGAACTAAACAGTTATATGTCTGTCAGCACCTCTACATCTGTGATTGTTGACAAGAGTTCTGACGGCGAATTTTTGCGTATAGATTTCAATATCAGTTTTCCTGCACTTTCATGTGAGTTTGCATCAGTGGATGTGAGTGATGTGCTGGGAACAAACAGGCTCAATATAACAAAAACAGTTCGTAAGTTTTCTATTGATTCACATTTAAGACCCACTGGTGCTGAGTTTCATTCAGGAACAGTTGCAAATGCTGTTAAGCATGATGATGAAGTAGATGAAGAATCTGTCGAAGGTTCTTTTCCACTTACAGCACAGAGTTTTGATAAATATGTCCATCAGTTTCCAATTACAGTTGTAAATTTTTACGCACCTTGGTGTTCCTGGTGTAAACTTTTGAAACCTTCATGGGAGAAGGCAGCCAAGGCAACAAAAGAGAGATATGATCCGGAAATTGATGGGCGTATTCTTTTGGCCAAGGTAGATTGCACTCAAGAAGCTGACTTATGCAGGAGGAATCACATACAAGGGTATCCTTCTATTCGCATTTTTCGTAAAGGAAGTGATCTCAGAAGTGACCACGGACAGCATGAACATGAGTCCTATTATGGAGACCGTGATACAGAAAGTCTAGTCAAGATGGTGGAGAATTTAGTGGCATCTCTCCCAACAGAATCTCAAAAGCTAGCCTTGGAGGATAAATCTAATACAACAGAGAATACAAAAAGACCAGCACCATCGGCAGGTGGATGTAGAATTGAGGGACATGTGCGTGTGAAAAAGGTTCCAGGAAAATTGGTCATCTCTGCTAGATCAGATGCGCACTCCTTTGATGCTTCTCAAATGAACATGTCACATGTAGTAAACCACCTGACCTTTGGAAAGAAAGTGACACCTAGGGCCATTAGTGATATGCAGCGCTTGATACCTCACATAGGTAGCAGCCATGACAGGCTGAATGGGCGGTCATTCGTCAATACTCATAATTTAGAAGCAAATGTTACTATAGAGCATTATATTCAGATAGTTAAGACAGAGGTAGTGACTAGAAATGGTTACAAATTAATTGAGGACTACGAGTACACAGCGCACAGCAGTGTGGCACACAGTTTAGACATTCCTGTTGCAAAGTTTCATCTTGAGCTCTCCCCCATGCAGGTTTTAATAACAGAAAACCAGAAGTCTTTTTCACATTTTATTACAAATGTCTGTGCTATTATTGGGGGCGTCTTCACGGTTGCTGGAATTGTCGACTCAATTCTGCATAACACTATTAGAATGATAAAGAAAGTTGAGCTTGGCAAAAACTTCTGA 1443 0.4082 MISSSKIKSVDFYRKIPRDLTEASLSGAGLSIVAALSMLFLFGMELNSYMSVSTSTSVIVDKSSDGEFLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFSIDSHLRPTGAEFHSGTVANAVKHDDEVDEESVEGSFPLTAQSFDKYVHQFPITVVNFYAPWCSWCKLLKPSWEKAAKATKERYDPEIDGRILLAKVDCTQEADLCRRNHIQGYPSIRIFRKGSDLRSDHGQHEHESYYGDRDTESLVKMVENLVASLPTESQKLALEDKSNTTENTKRPAPSAGGCRIEGHVRVKKVPGKLVISARSDAHSFDASQMNMSHVVNHLTFGKKVTPRAISDMQRLIPHIGSSHDRLNGRSFVNTHNLEANVTIEHYIQIVKTEVVTRNGYKLIEDYEYTAHSSVAHSLDIPVAKFHLELSPMQVLITENQKSFSHFITNVCAIIGGVFTVAGIVDSILHNTIRMIKKVELGKNF* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3837 480 CDD PDI_a_family 146 256 - -
Lja3g3837 480 Pfam Endoplasmic reticulum vesicle transporter 288 461 IPR012936 -
Lja3g3837 480 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 480 - -
Lja3g3837 480 Gene3D Glutaredoxin 130 289 - -
Lja3g3837 480 MobiDBLite consensus disorder prediction 269 287 - -
Lja3g3837 480 MobiDBLite consensus disorder prediction 269 294 - -
Lja3g3837 480 Pfam Thioredoxin 145 243 IPR013766 -
Lja3g3837 480 ProSiteProfiles Thioredoxin domain profile. 114 263 IPR013766 -
Lja3g3837 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 480 IPR045888 -
Lja3g3837 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Lja3g3837 480 SUPERFAMILY Thioredoxin-like 145 261 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3837 Lja-Chr3 75509794 75518921 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3837 - - gmx:100787595 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3837 3 75509794 75518921 Lja3g3837 3 75509794 75518921 ECH