Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3834 ATGGCTTCCACCACCACCACCACCTTCACCTCCTCCTCCTCCTCCTCCTCATTCCTCCACACCAAAATCCCAACCCCATCCTCTCTCTCCTCCTTCAACAAACCACTCACCTTCCAATCCATGAAACCTTCACTGAGGAAGCTCTGCATGTCCATGGCTGCATCATCTGCACCTTCACCACCTCCACCCTATGATCTCGGATCCTTCAAATTTGCGCCGATCAAGGAGTCCATTGTCTCACGCGAGATGACGCGCAGGTACATGACCGACATGGTCACCTTCGCTGATACCGACGTCGTCATCGTCGGTGCCGGTTCCGCCGGGCTCACCTGCGCCTACGAGCTCAGTAAGAACCCCAACGTCCAGGTTGCTATCATTGAGCAATCTGTTAGCCCCGGTGGCGGCGCGTGGCTCGGTGGCCAACTCTTCTCTGCCATGGTAGTGCGCAAGCCAGCACATCTGTTCTTGAATGAGCTTGGAGTGGATTATGATGAGCAGGACAACTATGTGGTGATCAAGCATGCTGCTCTCTTCACTTCCACAATCATGAGCAAGCTGCTGGCTAGGCCTAATGTGAAGCTTTTCAATGCTGTGGCCGCTGAGGATTTGATTGTGAAAAATGGGAGAGTTGGTGGGGTTGTCACCAACTGGGCTTTGGTTTCCATGAACCATGACACCCAATCCTGCATGGATCCTAATGTCATGGAGGCCAAGGTGGTGGTAAGCTCTTGTGGCCATGATGGGCCTTTTGGAGCCACTGGGGTGAAGAGGCTTAAGAGCATTGGTTTGATTGATAGGGTGCCTGGAATGAAGGCCCTTGACATGAACACTGCTGAGGATGCTATTGTCAGGCTTACCAGGGAGGTTGTGCCTGGAATGATTGTTACTGGGATGGAAGTTGCTGAGATTGATGGTGCTCCAAGAATGGGTCCAACATTTGGAGCTATGATGATATCAGGGCAGAAGGCAGCACATTTGGCCTTGAGATCACTGGGGCTTCCCAATGCTGTGGATAAAAATAATGCTGCAGGGAAGATCCACCCAGAGCTTGTCCTAGCTGCTGCTACTGAATCTGCTGAAATTGCAGATGCTTAA 1095 0.5196 MASTTTTTFTSSSSSSSFLHTKIPTPSSLSSFNKPLTFQSMKPSLRKLCMSMAASSAPSPPPPYDLGSFKFAPIKESIVSREMTRRYMTDMVTFADTDVVIVGAGSAGLTCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLNELGVDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKNGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGLIDRVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALRSLGLPNAVDKNNAAGKIHPELVLAAATESAEIADA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3834 364 MobiDBLite consensus disorder prediction 1 20 - -
Lja3g3834 364 SUPERFAMILY FAD/NAD(P)-binding domain 56 324 IPR036188 -
Lja3g3834 364 Pfam Thi4 family 80 313 - -
Lja3g3834 364 Gene3D - 65 95 - -
Lja3g3834 364 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 12 340 IPR027495 GO:0009228
Lja3g3834 364 Gene3D - 96 331 IPR036188 -
Lja3g3834 364 PANTHER THIAMINE THIAZOLE SYNTHASE 11 364 - -
Lja3g3834 364 PANTHER THIAMINE THIAZOLE SYNTHASE, CHLOROPLASTIC 11 364 - -
Lja3g3834 364 TIGRFAM TIGR00292: thiazole biosynthesis enzyme 76 330 IPR002922 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3834 Lja-Chr3 75495667 75498561 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3834 K03146 - gmx:547462 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3834 3 75495667 75498561 Lja3g3834 3 75495667 75498561 ECH