Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3825 ATGCAGTTGCAGATATCACCAAGTTTAAGGCATGTCACAATACTTTCAGGAAAAGGGTTGAAGGAATTTATCAAAGTGAGGGTTGCATCAAGGAGGCTTTCTTATTGGATGCTCTTTTATTCACTCCTGTTCTTCACTTTTCTTCTTCGGTTTGTATTTGTTTTGACAGCAGTGGATAGCATAGATGGTGAAAACAAGTGCTCTACCATAGGTTGCCTTGGAATGAAACTGACGCCAAAGGTTTTGGGAAGAAGTCTTGAATCAACTGTCCCAGAAGTTATATACGGAATATTAGATCAACCCCTTAGCAAAGATGGACTGGAGGGAAGATATGATGTTCCTCAAACTTTAGAAGAGTTCGTGTCCCAAATGAAGGAAGGTGGATATGATGCCAAGACATTTGCACGTAAACTACGAGAAATGGTAACCCTAATGGAACAAAGGACCAGGATGGCAAAAGTCCAGGAATATTTATACCGTCATGTAGCATCAAGCAGCATGCCAAAACAGCTTCACTGTCTTGAACTGAGGCTAGCCAGTGAGCACACGAACAACGCCGCAGCGCGCCTTCAGCTACCCTCTGCAGAACTTGTCCCTGTCCTTGTTGACAATTCCTACTTCCACTTTGTCCTTGCCTCAGACAATGTGCTTGCCGCCTCCGTGGTTGCCAAATCACTTGTTCACAACAGCTTGCAGCCTCAGAAAGTTGTTCTGCACATAATAACTGATAGAAAGACTTATTATTCAATGCAAGCTTGGTTTTCATTGCACCCTTTATCACCAGCTATAATTGAGGTCAAGGCCTTGCACCATTTTGACTGGTTTGCAAAGGGAAGAGTGCCTGTGATGGAGGCCATGGAGAAAGATCAAAATGTGCGGTCACGGTTCAGAGGGGGTTCATCAGCTATTGTTGCAAATGCTACTGAGAAGCCGACTGTTATTGCAGCAAAGCTGCAAGCACTTAGTCCCAAGTATAATTCAGTGATGAATCACATTAGGATACATATTCCAGAGTTGTTCCCAAGTCTTTACAAGGTGGTCTTCCTAGATGATGACATTGTGGTACAAACTGATCTATCTCCTCTGTGGAATATTGACATGAATGGGAAAGTCAATGGAGCAGTAGAAACATGCAGTGGAGATGATAAGTTTGTGATGTCAAAGAGATTGAAAAGCTATTTGAACTTCTCTCACCCTCTAATATCAGAGAATTTTGATCCCAATGAATGTGCATGGGCTTATGGCATGAACATTTTTGACCTGGAGGCATGGAGGAAGACCAATATAAGCTTTACATACCATTACTGGGTTGAGCAGAATATAAAATCAGACCTCAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTAATAGCATTCCATGGTTATGTCCATACTATTGATCCTTTTTGGCACATGCTGGGATTAGGATATCAGGAAAATACAAGTTTTGCTGATGCTGAGAGTGCTGCAGTCATCCATTTTAATGGCAGGGCAAAGCCATGGCTAGATATTGCTTTTTCACAACTAAGGCCACTGTGGACCAAGTATGTTGACTTTTCGGATAACTTCATTAAGAGTTGTCACATTAGAGCATCATAA 1602 0.4226 MQLQISPSLRHVTILSGKGLKEFIKVRVASRRLSYWMLFYSLLFFTFLLRFVFVLTAVDSIDGENKCSTIGCLGMKLTPKVLGRSLESTVPEVIYGILDQPLSKDGLEGRYDVPQTLEEFVSQMKEGGYDAKTFARKLREMVTLMEQRTRMAKVQEYLYRHVASSSMPKQLHCLELRLASEHTNNAAARLQLPSAELVPVLVDNSYFHFVLASDNVLAASVVAKSLVHNSLQPQKVVLHIITDRKTYYSMQAWFSLHPLSPAIIEVKALHHFDWFAKGRVPVMEAMEKDQNVRSRFRGGSSAIVANATEKPTVIAAKLQALSPKYNSVMNHIRIHIPELFPSLYKVVFLDDDIVVQTDLSPLWNIDMNGKVNGAVETCSGDDKFVMSKRLKSYLNFSHPLISENFDPNECAWAYGMNIFDLEAWRKTNISFTYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGYVHTIDPFWHMLGLGYQENTSFADAESAAVIHFNGRAKPWLDIAFSQLRPLWTKYVDFSDNFIKSCHIRAS* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3825 533 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 531 - -
Lja3g3825 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 526 IPR029044 -
Lja3g3825 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
Lja3g3825 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 531 IPR029993 GO:0047262
Lja3g3825 533 CDD GT8_like_1 207 519 - -
Lja3g3825 533 Pfam Glycosyl transferase family 8 206 506 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3825 Lja-Chr3 75338883 75342174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3825 1 533 Glycosyltransferase AT5G54690 77.570 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3825 K20867 - gmx:100777811 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3825 3 75338883 75342174 Lja3g3825 3 75338883 75342174 ECH