Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3822 ATGGCAGGGAAACAACAGCTCAAAAAGTCCAAGGTTGTGAAAATTGACTCACAGAAATCATGGGAACACCACATCACTGATGCTACAATTAAAGGCTGTCCTGTTATGGTTCATTTCTCTGCTTATTGGTGTGTGCCTTCTATTGCTATGAACCCTTTCTTTGAAGAACTGGCCTCCACCTATCAAGGTGTAATCTTTCTGAAGGTGGATGTGGACGAGGTTAAGGAAGTTGCCTCCAAGTTCCAAATCAAAGCCATGCCTACCTTTTTGTTGATGAGTGGAGGAGCTCCAGTAGATAAAACTGTGGGAGCAAATTCAGATGAGATAAGGAAAAAAATTGATCATTTTATTCACCAAACTCATTCCTCCAAATCAATCTGA 381 0.4094 MAGKQQLKKSKVVKIDSQKSWEHHITDATIKGCPVMVHFSAYWCVPSIAMNPFFEELASTYQGVIFLKVDVDEVKEVASKFQIKAMPTFLLMSGGAPVDKTVGANSDEIRKKIDHFIHQTHSSKSI* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3822 126 SUPERFAMILY Thioredoxin-like 8 118 IPR036249 -
Lja3g3822 126 Gene3D Glutaredoxin 2 124 - -
Lja3g3822 126 Pfam Thioredoxin 14 114 IPR013766 -
Lja3g3822 126 PANTHER THIOREDOXIN 1 125 - -
Lja3g3822 126 PANTHER MONODEHYDROASCORBATE REDUCTASE (NADH)-RELATED 1 125 - -
Lja3g3822 126 ProSiteProfiles Thioredoxin domain profile. 1 118 IPR013766 -
Lja3g3822 126 CDD TRX_family 19 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3822 Lja-Chr3 75312512 75314485 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3822 K03671 - gmx:100500083 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3822 3 75312512 75314485 Lja3g3822 3 75312512 75314485 ECH