Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3814 ATGGCTACAAGTGTGAAGTTCTCATGCATGGTTGTTGCCATCTGCATGGCGTTGGTGGCAGCACCCATGGCAGAGGCTGCAATCTCATGTGGGTCGGTGATAGGCGCCCTTACACCTTGCATGCCTTACCTGACTGGCGGTCCTGCTCCATCGCCTCAGTGCTGTGCCGGAGTGAAGAACCTGAACGCCGCCGCGAGCACCACCCCTGACCGCAAGACTGCTTGCGGGTGCTTGAAGAACGCTGCTGGTTCTATGCCTAATCTGAATGCCGGTAATGCTGCTGCTCTCCCTGGCAAATGTGGTGTCAACATCCCTTACAAGATCAGCACCTCCACCAACTGCAACACCATCAAGGCTTGA 360 0.5611 MATSVKFSCMVVAICMALVAAPMAEAAISCGSVIGALTPCMPYLTGGPAPSPQCCAGVKNLNAAASTTPDRKTACGCLKNAAGSMPNLNAGNAAALPGKCGVNIPYKISTSTNCNTIKA* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3814 119 Pfam Protease inhibitor/seed storage/LTP family 30 114 IPR016140 -
Lja3g3814 119 PANTHER - 3 116 IPR000528 GO:0006869|GO:0008289
Lja3g3814 119 SMART aai_6 30 114 IPR016140 -
Lja3g3814 119 ProSitePatterns Plant lipid transfer proteins signature. 96 117 IPR000528 GO:0006869|GO:0008289
Lja3g3814 119 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 117 IPR036312 -
Lja3g3814 119 CDD nsLTP1 28 115 - -
Lja3g3814 119 PRINTS Plant phospholipid transfer protein signature 29 45 IPR000528 GO:0006869|GO:0008289
Lja3g3814 119 PRINTS Plant phospholipid transfer protein signature 49 63 IPR000528 GO:0006869|GO:0008289
Lja3g3814 119 PRINTS Plant phospholipid transfer protein signature 70 85 IPR000528 GO:0006869|GO:0008289
Lja3g3814 119 PRINTS Plant phospholipid transfer protein signature 87 104 IPR000528 GO:0006869|GO:0008289
Lja3g3814 119 PRINTS Plant phospholipid transfer protein signature 105 116 IPR000528 GO:0006869|GO:0008289
Lja3g3814 119 Gene3D - 27 119 IPR036312 -
Lja3g3814 119 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 3 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3814 Lja-Chr3 75209141 75209770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3814 1 118 Acyl Lipid Metabolism Gene Families AT5G59320 53.782 9.82e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3814 - - mtr:MTR_4g027840 155.221