Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3813 ATGGCGGAGCATGTAGCAGCCTTGCACACTGCTACTAATGCTTTGCAAGCGTTAGGAAGGGGGTTTGATGTGAACTTCGATACAAGATTGCTTTATTGCAAAGGAGTTTCAGGGTCTAGGTTAGTTGAGATTGATGAAGAACACCCGAGGGACTTGTGCTTGTACGAGGATGTGGTTGTTCCTAACGTGTCCAGAGATATTGGAAGCTCTCCGGAGTCCAATGAGCGTCAGAGTTCTGGGGTTTGCAGTTTCCAAGAGATGGTTGAATATTTTAATCGTAAGGCAAATATATCAGGGAGCTATCCTCTTGGGAGCTTTAACTCAGCATTTAGCTTCACTGGTTCAAAATATGTTGATGATGTAGCCACAAAAACCTTGTCTTCAGATGGGTTTTTCATTCCGCTTGCAAAGCTTCAGCTCAATAAACCCCGCTTACTGTTGCAAGAAAATGTCAAAAGGGCTATCCCAGTCAATTGGGATCCACCATCCTTGGCAAGCTTTATTGAAAATTTTGGGACACATGTCATTACTTCAATAACTATTGGTGGTAAAGATGTTATTTACGTCAAACAACACAATACTTCACCTTTGTCAAGGTTGGAGATGAAAAACTACATTCGGGATATTGGGAATCAGAGGTTTTCTGACATCAATAGCCATACAAGCTTAGGTCAAACAAAATCCAAGGATAAGGGTGTTGATCCGTTTTCATTCAATAGTCAAGGGATTTACCCTCAACCCACAACAGCAACATATCCTACTGGGAAAGAAGATGTCACAGTCATTTTTAGGAGGAGAGGAGGAGATGATTTGGAACAAAACCACAGTATATGGATAAATACAGTCAAGTCCTCCCCAGATATAATTGAGATGACTTTCTGTCCAATAACAGATCTCCTAGATGAAGTACCTGGCAAAGAGCATTTGACTCATGCCATTGGTCTTTATCTTGAATATAAACCTCCAATTGAAGAACTTAGATATTTCCTAGAGTTTCAGATTCCTCGTGTTTGGGCTCCTATGCACGACAGGATACCTGGTCAGCAAAGGAAGGAACCTGTGTGCCCATCTTTGCAGTTTAGTATAATGGGCCAGAAACTTTACGTCAGTCAAGAACAGATTACAGTTGGACGTAGGCCAGTAACTGGCATACGTCTTTGTCTAGAAGGAAGCAAGCATAATCGATTGAGTGTTCATCTTCAACACTTGGTATCCCTTCCAAAAATCCTTCAGCCATATTGGGACAGCCATGTAGCTATTGGCGCTCCCAAGTGGCAGGGACCTGAGGAACAAGACAGTCGGTGGTTTGAGCCTGTTAAGTGGAAGAATTTTTCTCATGTGAGCACCGCACCTGTCGAGAACCCTGAAACGTTCATAGCAGACTTCTCCGGTGTCTGCGTAGTCACGGGAGCGCAGCTTGGAGTTTGGGATTTCGGATCACGGAATGTACTGTACATGAAGCTCTTGTACTCAAGGTTACCTGGCTGCACAATCCGAAGATCACTGTGGGATCACATCCCAAACAAGCCACTCAAAACGGTGAGTGTGGGGAACACTTCCAACCCAGATGAATCGAGCATTAGTTCTAGAGAAAACACCACCACAGGGAACAAATTGGTTAAGTATGTTGACTTGTCTGAAATGAGCAAAGGACCGCAAGATCCTCCTGGCCATTGGTTAGTAACTGGTGGAAAGCTTGGTGTTGAAAAAGGGAAGATTGTTTTGAGACTGAAATATTCATTGCTTAATTACTGA 1755 0.4325 MAEHVAALHTATNALQALGRGFDVNFDTRLLYCKGVSGSRLVEIDEEHPRDLCLYEDVVVPNVSRDIGSSPESNERQSSGVCSFQEMVEYFNRKANISGSYPLGSFNSAFSFTGSKYVDDVATKTLSSDGFFIPLAKLQLNKPRLLLQENVKRAIPVNWDPPSLASFIENFGTHVITSITIGGKDVIYVKQHNTSPLSRLEMKNYIRDIGNQRFSDINSHTSLGQTKSKDKGVDPFSFNSQGIYPQPTTATYPTGKEDVTVIFRRRGGDDLEQNHSIWINTVKSSPDIIEMTFCPITDLLDEVPGKEHLTHAIGLYLEYKPPIEELRYFLEFQIPRVWAPMHDRIPGQQRKEPVCPSLQFSIMGQKLYVSQEQITVGRRPVTGIRLCLEGSKHNRLSVHLQHLVSLPKILQPYWDSHVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPVENPETFIADFSGVCVVTGAQLGVWDFGSRNVLYMKLLYSRLPGCTIRRSLWDHIPNKPLKTVSVGNTSNPDESSISSRENTTTGNKLVKYVDLSEMSKGPQDPPGHWLVTGGKLGVEKGKIVLRLKYSLLNY* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3813 584 Pfam MAC/Perforin domain 104 316 IPR020864 -
Lja3g3813 584 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 330 IPR020864 -
Lja3g3813 584 MobiDBLite consensus disorder prediction 514 533 - -
Lja3g3813 584 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1-LIKE 6 584 - -
Lja3g3813 584 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 6 584 IPR044663 GO:0006952|GO:0012501|GO:2000031
Lja3g3813 584 SMART MACPF_8 123 318 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3813 Lja-Chr3 75178878 75186326 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3813 - - aprc:113849343 1064.68