Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3811 ATGTGCACTGGTGCTGCGGCTGAATCTCGAGGAAATATAAATGCTGAGCCTGTGACTTCAAAGGTCGGAGAATACCATGAAGACAGAATGGGAACAGCAGAAGCTGGCGAAATAGCTTGCAACTCTGGCTCAGGCCTTCTTCAACGCCTACATTATCACCTCACTCCACTGCTCCCTAACCTTAAAATCTCTGAGGTGAAGGAAGAGTTGCAATCTCTTGCAAAGGTTGCATGTCCTGTAGTAATGACTGGTCTTATGATGTACTCTAGATCTGCTGTGACCATGCTCTTCTTAGGTCGCCAAGGGAAAGTAGAGCTAGCAGGAGGCTCACTTGGACTTGGTTTCGCGAACATCACTGCCAATTCAATCCTCAAGGGACTCAACATGGGAATGGATCCCATTTGTTGCCAAGCTTATGGAGCCAAGAGATGGTCAGTTCTCAGCCAAACCTTTTACAGAACACTCTGTCTCCTCCTACTTGTTACCATCCCCATTTCACTCTTATGGCTGAACATGGAACCTATCCTTCTAATGCTAGGTCAAGACCCTCAAGTCACAAAAGTTGCCCAAGTTTACATGATCTTCTCTATCCCAGAGTTGCTAGCTCAAGCTCACCTCAATCCACTGAGGACTTTCTTGAGAACCCAAGGCATAACCACCCCAGTTACTATAACAGCATGTTGTGCAGCAATGTTGCACCTCCCCATCAACTATTTCTTTGCCACATACTTGAATTTAGGGGTGAAGGGAATTGCATTAGCCACTGGTTTAAACTCTATAAACATAATTCTAGGTTTGTTGCTTTATCTTTTTTTCTCAAAGAAACCAATAAAACCATGGCAGGGAGCTAGTTTTCTCTCATCAGCTTTCCATGGGTGGAGACCATTGCTGAGCCTAGCAATTCCTAGCTGCCTTTCTGTGTGCTTGGAGTGGTGGTGGTATGAGATCATGCTCTTTCTTTGTGGCACGTTAAGCAATCCACAAACCACAGTTGCTACCATGGGGATACTCATTCAAACACTTGGATTCTTGTATGCATTCCCATTTTCTCTTAGTGCAGCCTTGACAACAAGAATTGGTCACTCCTTAGGTGCAGGGCAACCCTCCAGAGCGCAAAGCACAGCCATACTTGGGTTTGTCATAGCATTTGCACTTTCCATCTTAGCCTTGATTTTGTTGATTTCTCTGAGGAAGAGCTGGGCAAGACTTTTCACTGATGAGGCACAAGTTGTTGACATGGTTGCTACTATACTTCCAATTATGGGGCTGTGTGAAATTTTCAACTGGCCTCAAACAGCATCATGTGGGATTTTATCAGGGACAGCACGTCCTTACTTGGGTGCTAGAATAAACTTGTGTGCATTTTACCTAATTGGGTTGCCAGTTTCTGTTTTTGCTACCTTCATCTACAAATATGAATTGGTGGGGTTGTGGTTTGGAATGTTAGCAGCACAGTTTTCTTGTGTTTGTATGATGGTGTATGCATTGATTCAAACAGATTGGGGGCAGCAAACTAAGAGAGCAGTGGAGCTAGCTCAGAAAACAACAGAGCAGGAAAATGTAGATGATGAGGAAAGTGGGCTGCTTGATCCCTGA 1596 0.4455 MCTGAAAESRGNINAEPVTSKVGEYHEDRMGTAEAGEIACNSGSGLLQRLHYHLTPLLPNLKISEVKEELQSLAKVACPVVMTGLMMYSRSAVTMLFLGRQGKVELAGGSLGLGFANITANSILKGLNMGMDPICCQAYGAKRWSVLSQTFYRTLCLLLLVTIPISLLWLNMEPILLMLGQDPQVTKVAQVYMIFSIPELLAQAHLNPLRTFLRTQGITTPVTITACCAAMLHLPINYFFATYLNLGVKGIALATGLNSINIILGLLLYLFFSKKPIKPWQGASFLSSAFHGWRPLLSLAIPSCLSVCLEWWWYEIMLFLCGTLSNPQTTVATMGILIQTLGFLYAFPFSLSAALTTRIGHSLGAGQPSRAQSTAILGFVIAFALSILALILLISLRKSWARLFTDEAQVVDMVATILPIMGLCEIFNWPQTASCGILSGTARPYLGARINLCAFYLIGLPVSVFATFIYKYELVGLWFGMLAAQFSCVCMMVYALIQTDWGQQTKRAVELAQKTTEQENVDDEESGLLDP* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3811 531 PANTHER PROTEIN DETOXIFICATION 53 53 518 - -
Lja3g3811 531 CDD MATE_eukaryotic 69 507 IPR045069 GO:0042910|GO:1990961
Lja3g3811 531 PANTHER MULTIDRUG RESISTANCE PROTEIN 53 518 - -
Lja3g3811 531 TIGRFAM matE: MATE efflux family protein 79 478 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja3g3811 531 Pfam MatE 79 239 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja3g3811 531 Pfam MatE 302 464 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3811 Lja-Chr3 75161560 75170718 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3811 K03327 - gmx:106798137 827.394