Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3804 ATGGCTGCTGCTACTAGCTTTGGAACTTCATGGTGTCTAAGAAGAGCAGCTCATGCTTTTGCTCTCTCTCATCTTCATATTCTACGCAGCAATGCCAACCTCTCTTTCCAAACTACCCTCACCGCCTCTCATCTTCTCTCCGTTTCCACTTCTTCAGCCTCAGGGGTCAGCCAGACTGTACAGGCTTTAAAAGGAGAATTTGATGTGTTACTCAAGGGAGTTGGAGAAAGAAGTGTAACAAAAGAAGTGAAGCATATTCTTGAAATGGCTAAACGAGCATCATTAAAACGAGAGGTTCTCCATACAGATTTTCTAACCCCTCCAGTGGTGAAGGAATCTATGCAAATATTGGAAAAATTAGCAGAAGTGAAAGCAATTGCTCAAGGAGGTTACCCACAGGCTGAACGATGTCGGATTTCTGTTGGTCATCCAGATGTACTGACAAGTGATCCAGTAGTTATTTCAGCATTAAGCATCACAGGGAACTTTCAGTTTGAACCTTGCTCTCATGGTGACTTCCTTGGCTCAGTTCTCGGTACAGGAATTGTCAGGGAGAAAGTTGGAGATATCATATTGCAGGGTGAGCAGGGTGCTCAGATACTAATTGTACCAGAACTTGTGGAATTTATTATGTCAACACTGGATAAGGTTGGTAATGTTTCTGTATCTTGCAGCAAGATACCATTAATTTCTCTTGACTATGAACCACCAAGAACAAGATCATTCAAAACTGTAGAAGCATCACTAAGAGTTGATGCACTTGCAAGTGCAGGATTTAAGATTTCACGTTCAAAGCTAGTTGACATGATCAGCCATGGTGATGTGCGTATCAACTGGATCTCTGTTACTACCAAAGGAACCACACTTAAGAGTGGAGATATTGTATCAGTTAGTGGAATGGGAAGATTAAAGATAGGAGAAATAAACCCCACAAAGAAAGGAAAATTTGCAGTGGAGCTCATTCGGTATTTGTAG 975 0.4164 MAAATSFGTSWCLRRAAHAFALSHLHILRSNANLSFQTTLTASHLLSVSTSSASGVSQTVQALKGEFDVLLKGVGERSVTKEVKHILEMAKRASLKREVLHTDFLTPPVVKESMQILEKLAEVKAIAQGGYPQAERCRISVGHPDVLTSDPVVISALSITGNFQFEPCSHGDFLGSVLGTGIVREKVGDIILQGEQGAQILIVPELVEFIMSTLDKVGNVSVSCSKIPLISLDYEPPRTRSFKTVEASLRVDALASAGFKISRSKLVDMISHGDVRINWISVTTKGTTLKSGDIVSVSGMGRLKIGEINPTKKGKFAVELIRYL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3804 324 Gene3D - 77 143 - -
Lja3g3804 324 SUPERFAMILY Alpha-L RNA-binding motif 108 310 - -
Lja3g3804 324 TIGRFAM PS_II_S4: photosystem II S4 domain protein 79 322 IPR017506 -
Lja3g3804 324 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 56 324 - -
Lja3g3804 324 Gene3D - 243 299 IPR036986 GO:0003723
Lja3g3804 324 CDD S4 250 299 - -
Lja3g3804 324 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 56 324 - -
Lja3g3804 324 Pfam Putative RNA-binding domain in YlmH 154 229 IPR040591 -
Lja3g3804 324 Gene3D - 149 232 IPR012677 -
Lja3g3804 324 ProSiteProfiles S4 RNA-binding domain profile. 249 309 - -
Lja3g3804 324 Pfam S4 domain 253 295 IPR002942 GO:0003723
Lja3g3804 324 SMART s4_6 249 311 IPR002942 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3804 - - aprc:113855078 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3804 3 74956778 74965705 Lja3g3804 3 74956778 74965705 ECH