Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja3g3800 | ATGGCGGCGGTTGTTGTGAGCGGCTTAAGGGTGAGTACGACGTCGGTGAAGGAGACGAAGGCTCTTCTGTGGCGCAAATTGGGAACGGGTGGAACAAGTATAAAGATGAAGGTTCACGCTGATGAATGCATTCCCATACGATTGTCTCCTTCTGGTGTTCTGAATAAAAGAATGGAACCTTACCCTCATAGGCCTCGCAAGAGCACTGATTGTGATCCACATTTCATGAAGGACTGGACTACTCCAAATCATGGTCCAATACAGAGCGTAAGAAGGGGTCAAAGTATTTCTGGGAAGTCAAATCTGTCTGTTAAGGCAAGGAAATCTAATGGTGAAATTGATCCATTCCCTCGTTGCGTTGTTCTTGACATTGAAGGAACTACTACTCCCATATCGTTTGTTTCAGAGATTCTTTTCCCGTATGCCCGTGATAATGTTGGGAGGCATCTATCTGCAATATATGATACCCCTGAGACTAAGGATGATATCAGGTTGCTCCGCTCCCAAGTTGAAAATGACCTTGAGCAAGGGATTTCAGGTGCTGTGCCTATACCCCCAGATGATGCTGGTAAAGAGAAAGTAATTGATTCTCTAGTTGCTAATGTTGATGCTATGATTAAAGCTGATAGAAAAATCACTGCCTTAAAAGAGTTGCAGGGCCATATATGGCGAACAGGTTTTGAGAATAATGAATTGGAGGGAATAGTTTTTGATGATGTACCAGAAGCTCTAGAAAAATGGCATGCCTTGGGAACAAAGGTATACATATATTCTAGTGGTAGCAGGTTGGCGCAAAGGCTTATATTTGGAAAAACAAACTATGGGGACCTCAGGAAATATTTATCTGGCTTTTTTGATACCGCAGTGGGGAACAAAAGAGAGACACGAAGTTACGTTGAAATTTCTCAGTCACTTGGTGTTGATAAGTCGTCAGATATTTTATTCGTCACTGATGTGTTTCAAGAAGCTACAGCTGCTAAGGCAGCAGGTTTAGAGGTGATAATTTCTATTCGACCAGGAAATGGGCCCCTCCCTGAAAATCATGGGTTCAAGACAATAAAATCCTTCTTGGAGATCTAA | 1080 | 0.4259 | MAAVVVSGLRVSTTSVKETKALLWRKLGTGGTSIKMKVHADECIPIRLSPSGVLNKRMEPYPHRPRKSTDCDPHFMKDWTTPNHGPIQSVRRGQSISGKSNLSVKARKSNGEIDPFPRCVVLDIEGTTTPISFVSEILFPYARDNVGRHLSAIYDTPETKDDIRLLRSQVENDLEQGISGAVPIPPDDAGKEKVIDSLVANVDAMIKADRKITALKELQGHIWRTGFENNELEGIVFDDVPEALEKWHALGTKVYIYSSGSRLAQRLIFGKTNYGDLRKYLSGFFDTAVGNKRETRSYVEISQSLGVDKSSDILFVTDVFQEATAAKAAGLEVIISIRPGNGPLPENHGFKTIKSFLEI* | 360 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja3g3800 | 359 | SFLD | C1.5.4: Enolase-phosphatase Like | 118 | 357 | - | - | |
| Lja3g3800 | 359 | PANTHER | BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED | 77 | 359 | - | - | |
| Lja3g3800 | 359 | MobiDBLite | consensus disorder prediction | 82 | 102 | - | - | |
| Lja3g3800 | 359 | Gene3D | - | 228 | 359 | IPR023214 | - | |
| Lja3g3800 | 359 | SFLD | enolase-phosphatase | 118 | 357 | IPR023943 | GO:0000287|GO:0019509|GO:0043874 | |
| Lja3g3800 | 359 | TIGRFAM | enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | 118 | 356 | IPR023943 | GO:0000287|GO:0019509|GO:0043874 | |
| Lja3g3800 | 359 | MobiDBLite | consensus disorder prediction | 60 | 74 | - | - | |
| Lja3g3800 | 359 | Gene3D | - | 131 | 227 | - | - | |
| Lja3g3800 | 359 | MobiDBLite | consensus disorder prediction | 60 | 102 | - | - | |
| Lja3g3800 | 359 | CDD | HAD_EP | 119 | 340 | IPR023943 | GO:0000287|GO:0019509|GO:0043874 | |
| Lja3g3800 | 359 | Coils | Coil | 356 | 359 | - | - | |
| Lja3g3800 | 359 | TIGRFAM | HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 | 212 | 330 | IPR006439 | - | |
| Lja3g3800 | 359 | PANTHER | METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE | 77 | 359 | IPR017714 | GO:0005737|GO:0019509|GO:0046872 | |
| Lja3g3800 | 359 | SUPERFAMILY | HAD-like | 118 | 359 | IPR036412 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja3g3800 | Lja-Chr3 | 74871859 | 74877955 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja3g3800 | K16054 | - | gmx:100796209 | 509.605 |
Event-related genes