Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3768 ATGTACAGCTTAAATAGAGATACCGAAAACATAGCAGACACACTCACAACTACAATGGCTTCTTCTCTGCCTCATCCCATAGGAAAAACCTCCCTTCTCATCACTTTATTCCTCTTCTTCTCATTCTTTACCTTCTTAGCTCATGCTGTTGTTCCTCAAAACGAAACCTTCAAATTCGAAAACTCTGGTGAACTAGGCCCTTACATTGTTGAGTATGGAGCTGACTACCGAATGATAAGCATCTTCACCTCTCCATTCCAAGTTGGTTTCTACAACACCACCCCAAACTCCTTCACTCTCGCTCTGCGTGTGGGCCTCCAACGCTCGGAGTCGCTCTTCCGGTGGGTCTGGGAGGCCAACAGAGGCAACCCAGTTAAAGAAAACGCCACCTTCTCGCTTGGAACCGACGGTAACCTCGTGCTTGCCGACGCTGACGGCAGAATCGCGTGGCAAACAAACACCGCCAATAAGGGCGTGGTGGCGTTCAGGTTACTTCCAAATGGCAACATGGTGTTACTTGATGCAAACGGGAAATTCGTCTGGCAAAGTTTTGACCACCCCACCGATACGATCCTGGTGGGGCAGTATCTGAGAGCTGGTGGGCCACGTGAGCTCGTTAGCAGGCTTTCCGAGAAGGAAAATGTGAATGGACCTTATAGCTTGGTGTTGGAGAGTAAAGGGCTGGGCTTGTACTACAAGCCCAAGAACGCTCCCAAGCCCATTCGCTATTGGTCTGAATCTTATGTTGAAAAAGGCTCATTGGAAAATGTCACATTCACATCTGACTCAGAAAGTTTTGAAATTGGGTTTGATTACTTTGTTGCCAACTCTTCCAATTTTGGCAACAGGATCCTTGGTAGGCCAGTCAACAACAGTACCTTGACATATCTTAGGCTTGGAATTGATGGTAACATTAAGTTCAACACTTATTTCCTAGATGTGCGTGATGGTGTTTGGAAAGTGACCTACACTTTGTTTGATAGAGATTCTGATGAGAGTGAGTGCCAATTGCCACAGAGATGTGGGAAATTTGGGCTTTGTGAGGAAAATCAATGTGTTGCTTGCCCATTGGAGAATGGACTATTTGGGTGGAGTAACAATTGCAGTGCTAAGGCTGTAACATCATGCAAGGCAAGTGAATTCCACTACTACAAACTTGAAGGAGTTGAGCATTACATGAGTAAATACACTACTGGGGATAGAGTAAGTGAAACTAATTGTGGAAACAAATGCACCAAAGACTGCAAGTGTGTGGGGTATTTCTACAACAAGGATAACTCAAGGTGTTGGGCAGCGTATGATCTACAAACCCTTACTAGAGTGGCGAATTCCACCCATGTAGGCTATATCAAGGTGCCTAATCAGAAATAA 1371 0.4537 MYSLNRDTENIADTLTTTMASSLPHPIGKTSLLITLFLFFSFFTFLAHAVVPQNETFKFENSGELGPYIVEYGADYRMISIFTSPFQVGFYNTTPNSFTLALRVGLQRSESLFRWVWEANRGNPVKENATFSLGTDGNLVLADADGRIAWQTNTANKGVVAFRLLPNGNMVLLDANGKFVWQSFDHPTDTILVGQYLRAGGPRELVSRLSEKENVNGPYSLVLESKGLGLYYKPKNAPKPIRYWSESYVEKGSLENVTFTSDSESFEIGFDYFVANSSNFGNRILGRPVNNSTLTYLRLGIDGNIKFNTYFLDVRDGVWKVTYTLFDRDSDESECQLPQRCGKFGLCEENQCVACPLENGLFGWSNNCSAKAVTSCKASEFHYYKLEGVEHYMSKYTTGDRVSETNCGNKCTKDCKCVGYFYNKDNSRCWAAYDLQTLTRVANSTHVGYIKVPNQK* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3768 456 Gene3D - 80 186 IPR036426 -
Lja3g3768 456 SUPERFAMILY alpha-D-mannose-specific plant lectins 96 234 IPR036426 -
Lja3g3768 456 CDD PAN_AP_plant 375 453 - -
Lja3g3768 456 PANTHER SECRETED GLYCOPROTEIN EP1, PUTATIVE-RELATED 32 455 - -
Lja3g3768 456 CDD B_lectin 70 187 IPR001480 -
Lja3g3768 456 PIRSF SLG 27 456 IPR035446 -
Lja3g3768 456 PANTHER - 32 455 - -
Lja3g3768 456 ProSiteProfiles Bulb-type lectin domain profile. 67 185 IPR001480 -
Lja3g3768 456 SMART blect_4 70 187 IPR001480 -
Lja3g3768 456 Pfam D-mannose binding lectin 116 198 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3768 Lja-Chr3 74337624 74339511 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3768 - - gmx:100804561 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3768 3 74337624 74339511 Lja3g3768 3 74337624 74339511 ECH