Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3761 ATGGCATTGTGTCACTTACGAGTCTCCCCTAACACTACTCTCCTCACAAACTTCACTCCCAAACCCAAACTCCACCATAACCGCTTAGCCTCATTCTCCCTTCCACACTCTTCCTCTTCAACCACCACAACTGCAATGGCTTCCACCGCTCAAAAGGTCCTGGTTCCGATCGCCGATGGGACCGAGCCCATGGAAGCTGTCATCACCATCGACGTCCTCCGCCGTTCCGGAGCTGACGTCACCGTCGCTTCCGCCTCCAACCGCCTCTCCGTTCAAGCCCTCCACGGCGTCAAGATCCTCGCCGACGCTTCCGTTTCTGACATTGCCGCCACCGCCTTCGACCTCGTCGCTCTCCCTGGAGGGGTTCCGGGTGTTGACAATCTTAGAGACTGCGGAGATTTGGAAGGGTTGGTGAAGAAGCATGTTGAGGATGGACGGCTCTATGCTGCAGTTTGTGCTGCTCCTGCAGTCGTGCTTGGGCCGTGGGGTTTGCTGAATGGATTGAAGGCAACTTGTTATCCGTCGTTTATGGAACAATTGGCTTCTTACACCACTTCTGTTGAGTCAAGGGTACAGCTTGATGGCAGAGTTGTGACCAGTCGAGCACCCGGCACCACAATGGAGTTCGGTGTTGCGCTAGTTGAGCAATTGTATGGAAAGGAGAAAGCTGATGAAGTTGCGGGTCCACTGGTCATGCGTTCCAATCATGGTGATGAATATACTTTTTTGGAGCTAAACCCAGTGCAATGGACATTTGACAGTCCACCAAAGATTCTTGTACCAATTGCTGATGGCACTGAGGAAATGGAAGCTGTGATTATAATTGATATTCTGCGAAGAGCAAAGGCAAATGTTGTGGTTGCGTCTGTTGAGGACAAACTGGAGATTGTGGCATCACGTAAAGTTAAACTGGAGGCAGACATTCTCCTTGACGAAGCAGCTAAACTTTCATATGACCTTATTGTGTTGCCAGGTGGACTAGGTGGTGCCCAAGCTTTTGCAAAGTCAGAAACCTTGGTGAGTTTGCTGAAAAATCAAAGAGAATCAAACAGATATTATGGAGCAATTTGTGCATCCCCAGCTTTAGTCTTGGAGCCCCATGGCTTGTTAAAGGGTAAAAAGGCCACTGCTTTTCCTGCCATGTGCAATAAATTATCAGATCAGAGTGAAGTTGAAAACCGAGTTGTAGTTGATGGCAACCTTATTACCAGCAGAGGTCCAGGAACTTCCATCGAGTTTGCTTTAGTTATTGTGGAGAAGCTCTTTGGACGCAAGTTAGCACTAGAACTTGCAAAGACAATAGTGTTCACAAGTCCATAA 1320 0.4879 MALCHLRVSPNTTLLTNFTPKPKLHHNRLASFSLPHSSSSTTTTAMASTAQKVLVPIADGTEPMEAVITIDVLRRSGADVTVASASNRLSVQALHGVKILADASVSDIAATAFDLVALPGGVPGVDNLRDCGDLEGLVKKHVEDGRLYAAVCAAPAVVLGPWGLLNGLKATCYPSFMEQLASYTTSVESRVQLDGRVVTSRAPGTTMEFGVALVEQLYGKEKADEVAGPLVMRSNHGDEYTFLELNPVQWTFDSPPKILVPIADGTEEMEAVIIIDILRRAKANVVVASVEDKLEIVASRKVKLEADILLDEAAKLSYDLIVLPGGLGGAQAFAKSETLVSLLKNQRESNRYYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEVENRVVVDGNLITSRGPGTSIEFALVIVEKLFGRKLALELAKTIVFTSP* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3761 439 CDD GATase1_DJ-1 53 217 - -
Lja3g3761 439 Pfam DJ-1/PfpI family 52 216 IPR002818 -
Lja3g3761 439 Pfam DJ-1/PfpI family 257 419 IPR002818 -
Lja3g3761 439 TIGRFAM not_thiJ: DJ-1 family protein 257 432 IPR006287 -
Lja3g3761 439 TIGRFAM not_thiJ: DJ-1 family protein 52 228 IPR006287 -
Lja3g3761 439 SUPERFAMILY Class I glutamine amidotransferase-like 255 436 IPR029062 -
Lja3g3761 439 CDD GATase1_DJ-1 258 421 - -
Lja3g3761 439 Gene3D - 44 244 IPR029062 -
Lja3g3761 439 Gene3D - 252 438 IPR029062 -
Lja3g3761 439 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 47 434 - -
Lja3g3761 439 PANTHER BNAA06G01020D PROTEIN 47 434 - -
Lja3g3761 439 SUPERFAMILY Class I glutamine amidotransferase-like 52 234 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3761 Lja-Chr3 74238448 74242787 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3761 K03152 - gmx:100803116 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3761 3 74238448 74242787 Lja3g3761 3 74238448 74242787 ECH