Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3752 ATGAGAACAGTTCATCTTCTCTTCTTCTTGTATGCCTTCATTGCACTTGCTGCCACTTTCTCTCTCCGTTTTCAAGCTCACGCTGCTCCTGCAGGTCCATTGATTAAGCATCTGTCTTCACTTATCAAATGGACAAGGTCTGCCTCCAAGACCCCACACTCAGATGAGAATGTTCTTCAGTTTGAGAATGGTTATGTAGTTGAGACTGTTGTCGAAGGAAACGAGATTGGTGTCATCCCTTATAGGATTCGTGTCTCCGAGGAAGATGGTGAACTCCTTTCTGTTGATGAAACTAATAGCAACGTCGTTCGAATTACCCTGCCATTGTCCCAATATAGTAGAGGAAGATTGGTTGCTGGGTCATTTCAGGGCTACACTGGTCATGTGGATGGAAAACCAAATGATGCTCGTTTTAATCATCCCAAAGGCATAGCCATGGATGATAAAGGAAATACTTACGTTGCTGACATTCAGAATATGGCTATCAGAAAGATTGGAGATGCTGGTGTGACAACCATTGCTGGAGGAAAGTCAAATGTTGCAGGCTATAGGGACGGTCCTAGTGAGGATGCTAAGTTCTCCAATGATTTTGATGTGGTATATGTTCGGCCCACCTGTTCTTTGTTGGTTATTGACAGAGGAAATGCTGCTCTGCGAAAAATTTCTCTTGACCAGGAGGACTGTGATTATCAATCTAGTTCAATTTCCAGTACAGATATCCTTACAGTTATTGGTGCTGTTATGGTAGGATATGCTACATGCATGCTTCAGCAGGGATTCGGATTGCCTTTCTTCTCAAAAACAAAACCTTCAGCGAGTGAGTTTAAAGAGCAAGTAAGCAGTGAGAAACACATGCCATTCCTGGAAAGCAGTAAAGAGGAGCCAGGATGGCCGTCTTTTGGACAGCTTATCGTTGATCTTTCTAAGCTCTCTCTTGAAGCACTGGCTAGAGCGTTCGCTCAAGTCATACCCTCACACTTGATCTCTGGAAGCCCCAAGAGAGGCCTAACACCACTAAATGATCGTTTTCTGATGCCGGAAGATCAAGTGTTGGTGAATAGGAAAACCACTCCTGCTCCTCTTATCGAGAATAGGCATGTGCCACAGGTCCATCACACTCCACGCACAGCAGAGAAATATTCAGAAATAAAGCCTCCAAAGATAAAATCAAGCAGTTTCAAGGACCCCTCTCTGTCGAGTAAGCACCGTTCTTCAAAACGACCTGAGTTCTACGGATCTACTGAGATTCCACCATATACTAAATCTAAGAGCCAGAAAGAAAGGCCAAGACACCGGCAACGGGAAAAGAGCGGAGAAGTTGTCTTTGGAGCAGAGCCTAAACCTGTTGAGACGAAGGCTGTTGATCAGAGCGCTACAAAGTTTGACCATTACAATATGAGGGCTAAGTATGTATCTGGGGAGTCCTATCGGTTCAACTCGCAGTAA 1446 0.4447 MRTVHLLFFLYAFIALAATFSLRFQAHAAPAGPLIKHLSSLIKWTRSASKTPHSDENVLQFENGYVVETVVEGNEIGVIPYRIRVSEEDGELLSVDETNSNVVRITLPLSQYSRGRLVAGSFQGYTGHVDGKPNDARFNHPKGIAMDDKGNTYVADIQNMAIRKIGDAGVTTIAGGKSNVAGYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRKISLDQEDCDYQSSSISSTDILTVIGAVMVGYATCMLQQGFGLPFFSKTKPSASEFKEQVSSEKHMPFLESSKEEPGWPSFGQLIVDLSKLSLEALARAFAQVIPSHLISGSPKRGLTPLNDRFLMPEDQVLVNRKTTPAPLIENRHVPQVHHTPRTAEKYSEIKPPKIKSSSFKDPSLSSKHRSSKRPEFYGSTEIPPYTKSKSQKERPRHRQREKSGEVVFGAEPKPVETKAVDQSATKFDHYNMRAKYVSGESYRFNSQ* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3752 481 Gene3D - 42 223 IPR011042 -
Lja3g3752 481 PANTHER NHL DOMAIN-CONTAINING PROTEIN 16 478 - -
Lja3g3752 481 MobiDBLite consensus disorder prediction 368 389 - -
Lja3g3752 481 MobiDBLite consensus disorder prediction 357 456 - -
Lja3g3752 481 SUPERFAMILY NHL repeat 76 224 - -
Lja3g3752 481 PANTHER - 16 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3752 Lja-Chr3 74119651 74125097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3752 - - gmx:100797841 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3752 3 74119651 74125097 Lja3g3752 3 74119651 74125097 ECH