Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3640 ATGGTGCACTCAAGTCATTTTCTGGCTTCTTTGCTTCTGGTGGTGTTGTTCAATGTGGCTAAAGGACAGCCTCTGGTACCTGCATTGTTCATATTTGGGGACTCAGTAGTTGATGTGGGCAATAATAACCAGTTACCCACCATTGTTAAGTCAAACTTCCTTCCTTATGGAAGAGACTTCCAGAATCACCAGCCAACAGGGAGATTTTGCAATGGAAAACTTGCCACAGACCTCACTGCTGAAAACCTGGGATTTACTTCTTACCCACCAGCTTACATGAACTTAAAGACCAAAGGAAATAACCTCTTGAATGGTGCCAACTTTGCCTCAGGTGCTTCTGGCTACTATGAACCTACAGCCAAGCTATATCATGCAATTCCTTTGAGCCAGCAACTTGAACACTACAAAGAATCCCAGAATATATTGGTGGGAGTAGCAGGGAAATCAAATGCTTCTTCAATTATTTCTGGTGCTATATATCTTATTAGTGCTGGGAGCAGTGACTTTGTTCAAAACTATTACATAAATCCTCTGCTTTACAAGGTTTATACTGCTGATCAATTCTCAGACATTCTCATCCAATGCTATGCCTCTTTCATTCAGAATTTATATGGACTTGGGGCAAGGAGGATTGGTGTGACAACATTAGCTCCAGTGGGTTGCTTGCCAGCCGCCATCACTCTCTTTGGCCATGATAGCAACCAATGTGTGGCAAGGCTAAACAATGATGCTGTTAACTTCAATAGAAAGCTAAACACCACATCTCAGAGCTTGCAAAAATCACTTCCTGGCCTCAAATTGGTCCTCCTTGATATCTACCAACCTCTCTATGACCTTGTCACTAAGCCTTCTGAAAATGGATTTGCCGAAGCAAGGAGGGCTTGTTGTGGAACCGGCTTGCTCGAGACGTCTATACTGTGCAATCAGAAGTCCATAGGAACATGTGCCAATGCATCTGAGTATGTCTTCTGGGATGGTTTTCATCCCTCAGAAGCTGCAAACCAGGTTTTGGCAGGTGATTTGATCGCTGCTGGCATCTCTCTGATATCCTGA 1053 0.4359 MVHSSHFLASLLLVVLFNVAKGQPLVPALFIFGDSVVDVGNNNQLPTIVKSNFLPYGRDFQNHQPTGRFCNGKLATDLTAENLGFTSYPPAYMNLKTKGNNLLNGANFASGASGYYEPTAKLYHAIPLSQQLEHYKESQNILVGVAGKSNASSIISGAIYLISAGSSDFVQNYYINPLLYKVYTADQFSDILIQCYASFIQNLYGLGARRIGVTTLAPVGCLPAAITLFGHDSNQCVARLNNDAVNFNRKLNTTSQSLQKSLPGLKLVLLDIYQPLYDLVTKPSENGFAEARRACCGTGLLETSILCNQKSIGTCANASEYVFWDGFHPSEAANQVLAGDLIAAGISLIS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3640 350 Pfam GDSL-like Lipase/Acylhydrolase 29 338 IPR001087 GO:0016788
Lja3g3640 350 CDD SGNH_plant_lipase_like 27 342 IPR035669 -
Lja3g3640 350 PANTHER GDSL-MOTIF LIPASE 9 349 - -
Lja3g3640 350 Gene3D SGNH hydrolase 18 346 IPR036514 -
Lja3g3640 350 PANTHER GDSL ESTERASE/LIPASE EXL3 9 349 - -
Lja3g3640 350 SUPERFAMILY SGNH hydrolase 29 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3640 Lja-Chr3 72190405 72192508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3640 19 341 Acyl Lipid Metabolism Gene Families AT4G10950 31.595 5.74e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3640 - - gmx:100804640 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3640 3 72190405 72192508 Lja3g3640 3 72190405 72192508 ECH
Lja3g3640 3 72190405 72192508 Lja3g0936 3 9516745 9519168 PCT