Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3580 ATGGCGTTTTCTCAGGTTATCACAGCTCTTCTTTTTGCCTTAGCTTTTGCAAGAATTGAGCTTTCTGCATGCCAAATGGTAAAGGGCAAAGTCTCTTGCACTGACTGCACTGACAACTATGACTTCTCTGGGATCAAGGTCTCAGTGAAGTGTGAAGGGGTGCAAAACAAGGCTCTGACAACAACTACAGAAGAAGATGGTTCCTTCAAGGTTCACCTTCCTTCACACTATGCAAAATCTCCTTCTATGAAATGCCTTGCAAAGCTTCTTGGAGGGCCAGATCTCCTTTATGCTTCAAGGAAAAACAGGGTCTCCCTAATTGTGAAGGCCAAAGAGGAAAATATCTACACCATCTCCACTCCTCTTAGTTTCTTCACATATTGCCCCCAAAACAGTGAATGCAAAGCTGCCAACGAGTTTGGTTCATCAAAAACTTTTGATTTTCCTATGCCTCCAGCATGGGGTTTGGCACCTAGTAGCTATTATTTCCCACTTCCTTTCTTCCCCATCATTGGAATACCTTGA 525 0.4343 MAFSQVITALLFALAFARIELSACQMVKGKVSCTDCTDNYDFSGIKVSVKCEGVQNKALTTTTEEDGSFKVHLPSHYAKSPSMKCLAKLLGGPDLLYASRKNRVSLIVKAKEENIYTISTPLSFFTYCPQNSECKAANEFGSSKTFDFPMPPAWGLAPSSYYFPLPFFPIIGIP* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3580 174 Pfam Pollen protein Ole e 1 like 27 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3580 Lja-Chr3 70944893 70945990 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3580 - - gmx:100306432 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3580 3 70944893 70945990 Lja3g3580 3 70944893 70945990 ECH
Lja3g3580 3 70944893 70945990 Lja3g0995 3 10218428 10220169 PCT