Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3447 ATGAGGGATTCAAATCTGGAGCTGCAGGAATCGGGCTGGGAAGAATTGCGAAAGGAAGCGCGCAAGATCGAGGGCGATCTCGACGTCAAGCTCTCTTCCTACGCCAAACTCGGCGCTAGGTTCACCCAAGGAGGTTATGTGGATGGTGGTTCACCACCTCTTGGGTCCAGTAGGTCTTGGAAGTCCATGGAGATGGAAATCCAGTCCTTGCTGGAGAAACTATTAGACATAAATGATTCAATGAGTAGATGTGCTGCATCTGCTGGACCAGCTACTTCTGTAACTCAAAAGTTGGCTAGGCACAGAGACATTCTTCATGAGTTTACCCAGGAATTTAGGCGTATTAAGGGGAACATAAACTCAATGAGGGAACATGCAGAGCTTTTGACTTCTGTGAGAGATGATATTTCTGACTTTAAGACATCGGGTAGCATGTCACCAAGGATGCAGTTACTACGAGAGAGAGCTGCAATCCATGGAAGTATATCTCATATAGATGATGTGATTAGTCAAGCTCAAGCAACAAGATCTGTATTGGGTTCTCAGAGGGCATTGTTTGGTGATGTTCAGGGGAAAGTGAAGGTTCTTGGCGACAAGTTCCCCATTATTCGAAGCTTGCTTGGTTCTATAAGAAGGAAACGCTCAAGGGATACCCTTATTCTGTCAGCAGTAATTGCTGCCTGTACATTGTTTCTCATCATTTATTGGCTCTCAAAGTAA 720 0.4514 MRDSNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLTSVRDDISDFKTSGSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVLGSQRALFGDVQGKVKVLGDKFPIIRSLLGSIRRKRSRDTLILSAVIAACTLFLIIYWLSK* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3447 239 PIRSF Golgi_SNARE 4 238 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Lja3g3447 239 Pfam Snare region anchored in the vesicle membrane C-terminus 150 214 - -
Lja3g3447 239 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-2 4 239 - -
Lja3g3447 239 PANTHER GOS-28 SNARE- RELATED 4 239 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3447 K08495 - gmx:100781813 443.351