Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3430 ATGCCAAAACGCAACACATCCAATTCAGAATCGGAGGGAACCTCAAGTTCAGGCTCAGACTCAGAGGAGGCAGAGACCGTGGGCAATGGGAAGCCCCAACAGCCGATCATGTCGGAGTACGAGCAACAGAGACTGCACCGGATTGCAGAGAACAGAGCGAGATTGGAAGCTCTGGGGTTGCCTCAAATGGCGTCGTCCTTGAAGGGCTTACCTCGTACTCGGAGTAAAACGAAAGGGAAAGAGAAGGTTGCAGATGATGATAAAGAGTATCAACCCGAAGACGAGGAAGAACCCGGTTCAAGTTCTTCAAGTGAAGAAGATGGGCATGACAAAGATGATGACTTTGCTCCTCAAAATGCTTCTGGGTCACGGAAACGAAAGGTGATGAACAAAAGTTTGAAGATGAAAGGGAGTGTCTCTAGGAAGAAGCGTGGTGGTGGTTCAGAGTGTATTGATGATGATGATGATGATGCTTTGAGGCAGGCAATTGCGCTTTCCCTGCAAGACTCTGCAGAAGTTTCATATTGCTCTGACAAGAGTGTGGTGAGCGTCAGCAAGGCTGAGAAGAAGGAAAACCTTCACATTCAAGAAGATAAAGGGAAAAAGAAGAACAAAAAATCGTTTACTAGTAGGCTGCAAATGACTGAGGATGAACTGATTGTACACTTCTTCCAGCTTGATGAAGCAGGAAAAGGATGTTTAGGTATAAGGGATATAGAAAGGGCAGCTACAGCTCATGATTTTATGTGGTCAGACAAAGAGTTGGCTGATATGATTCGTTGCTTTGATAGTGATGGAGACCGCAAGCTAAGTCTTGATGATTTCCGGAAGATTGCTGTTCGTTGCAACATGATTAAAGGGCCTGAAAATTCTTGA 876 0.4543 MPKRNTSNSESEGTSSSGSDSEEAETVGNGKPQQPIMSEYEQQRLHRIAENRARLEALGLPQMASSLKGLPRTRSKTKGKEKVADDDKEYQPEDEEEPGSSSSSEEDGHDKDDDFAPQNASGSRKRKVMNKSLKMKGSVSRKKRGGGSECIDDDDDDALRQAIALSLQDSAEVSYCSDKSVVSVSKAEKKENLHIQEDKGKKKNKKSFTSRLQMTEDELIVHFFQLDEAGKGCLGIRDIERAATAHDFMWSDKELADMIRCFDSDGDRKLSLDDFRKIAVRCNMIKGPENS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3430 291 MobiDBLite consensus disorder prediction 1 40 - -
Lja3g3430 291 MobiDBLite consensus disorder prediction 127 141 - -
Lja3g3430 291 Pfam Ubiquitin interaction motif 154 170 IPR003903 -
Lja3g3430 291 SUPERFAMILY EF-hand 208 282 IPR011992 -
Lja3g3430 291 Gene3D - 171 287 - -
Lja3g3430 291 MobiDBLite consensus disorder prediction 1 154 - -
Lja3g3430 291 ProSitePatterns EF-hand calcium-binding domain. 263 275 IPR018247 -
Lja3g3430 291 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 154 173 IPR003903 -
Lja3g3430 291 Pfam EF-hand domain pair 218 278 IPR002048 GO:0005509
Lja3g3430 291 MobiDBLite consensus disorder prediction 102 120 - -
Lja3g3430 291 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3430 32 287 EF-hand Containing Proteins AT1G73440 41.406 9.47e-48 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3430 - - gmx:100806103 325.865