Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3429 ATGAGTTCCGGCGAGCTCTTCCACATACACCCTCAGGAGCTTCAGTTTCCCTTTGAATTGAAGAAGCAGATCTCATGCTCCTTGCAGTTGTCTAACAAGACTGATAACTATGTAGCTTTCAAGGTTAAGACCACAAATCCCAAGAAGTATTGTGTTAGGCCTAACACTGGAGTTGTGTTGCCTGGGTCTACATGTGATGTTACAGTAACAATGCAAGCCCAAAAGGAGGCACCTCCTGACATGCAATGCAAGGATAAGTTTCTCCTTCAAGGCGTTGTTGCAAGCCCCGGAGCAACCATAAAAGATATCACTCCAGAAATGTTCAATAGAGAATCCGGCCATGATGTTGAAGAGTGCAGATTGAGAGTTGTTTACGTAGCTCCTCCTCGACCACCGTCCCCAGTTCGAGAAGGATCCGAAGAGGATTCATCTCCTCGAGCATCTGTATCAGAAAATGGCCATTCAAGTGCTTTGGAGTTTCAGGCTGCTTCTAAAGGTTTCAATGAACGAGTTGAGGCTGAGGATACTTCATTTCAGGCAAGAGCTCATATCTCTAAGCTAATTGAGGAGAAAACTTCTGTTATTGAGCATAATATAAGGCTTCAGCAAGAACTGGAGCTATTGAGGTGTGAAGGGAACAAAGGCCGTGGTGGTATACCATTAATGTATGTGGTTCTTGTTGGCTTGGTTGGCATCATTTTAGGTTTCTTATTGAAGAGGACGTGA 726 0.4435 MSSGELFHIHPQELQFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPGSTCDVTVTMQAQKEAPPDMQCKDKFLLQGVVASPGATIKDITPEMFNRESGHDVEECRLRVVYVAPPRPPSPVREGSEEDSSPRASVSENGHSSALEFQAASKGFNERVEAEDTSFQARAHISKLIEEKTSVIEHNIRLQQELELLRCEGNKGRGGIPLMYVVLVGLVGIILGFLLKRT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3429 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Lja3g3429 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
Lja3g3429 241 Pfam MSP (Major sperm protein) domain 7 109 IPR000535 -
Lja3g3429 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Lja3g3429 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Lja3g3429 241 MobiDBLite consensus disorder prediction 130 155 - -
Lja3g3429 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Lja3g3429 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3429 Lja-Chr3 67679772 67683749 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3429 - - gmx:100779655 400.208