Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3426 ATGGCTGCCTCAAACTCTCACAACGCTGCAATCCTCACACCACCAGGAATGGGACACATGATCCCTTCTCTAGAGCTTGCAAAGCGCCTAGTCACTCACCAAATTGTTCCCAAAGTCACCATCTTTCTTGCTTCCATTAAAACCTCTGTTCCATCTAAAGCAGAGACACAGCTTCTCCAATCTGCCACAAATGATAACCTCTTCCAAATCATCCATCTCCCACCACTTGACATGACCAATCTAGTTGGCCCCGACGCCACAATAGAAACCCAGGTAGCAGCCATAACGCATGAACTCCCTCCACTTTTTCTCTCCGCGATCTCCACCACGGAACATAACCCCACCATCCTCATCATTGACCAGGTCCTAAGCAACATTTTACCTCTGGTCGAGAATCTCAAAGTGCCCAAGTTCATTTTTGTTTCATCAAACGCATGGCTCCTTGCATTATCTCTTCACACTCCTATTTTAGATAAAGAGCTGCAAGGAGAGTACACGGATCAAAGCGAACCAATCTCAATCCCTGGTTGTAAATCAGTACATCCTGACGATGTGTTCCAATTGTTACGAGACAGGACACACAAGGTGTATCGTGAATATCTCAGCACATGTGAGGGGTTGGCGCTGGCGGATGCGATCCTTGTGAACACATTTAACGAGCTAGAACCGAAAACACTAGCAGCACTCAGCAGTGGAAAAGTCACCAAGGTGCCGGTATACCCAGTTGGGCTAATAGTCAGGGAAGAAATTAGAAGACAAGATGGAAGCGATGTTTTCGAGTGGCTAGATAAACAAGAAGAAGAATCTGTGGTGTATATTTCGCTAGGGAGCGGATACAGAATGTCTCAGGAGCAAATCAAAGAGATGGCTTTGGGTTTGGAGCTAAGTGGGCAAAGATTCGTTTGGTCTCTGCGCACACATGCAGCCACAAAAGCTGGGGATGCCATTGCCAACTATTTCACAGCGGGTAAAGAAACCCAAGCTGAAACTGGTGGTGGTGTGTCAAAATCTGAAGAGTTAAATTCTTTACCAGATGAGTTCTACCGCATACAAACTAGAGGCATGGTGATAACAGATTGGGCACCGCAATTGGATATTCTGAAGCACCCGTCTGTTGGTGGGTTTGTGAGTCACTGTGGATGGAACTCCGTGATGGAAAGTGTTTCGTGTGGGGTGCCGATAGTTGGATGGCCGCTCTATGCGGAGCAAGGGATGAACGCTGCAATGCTGGCTGAGGAAATTGGCATCGCGGTTCGATTGGAGTTGCCACTTTCTACCAATGTGGTTGGAAGGGAGGATCTGGCAAAAGCAATAAGGAAAGTTATGGATAAAGAGGACGAAGAAGGGTGTGAAATGAGGAAAAAAGTTAAGGAGCTCAAGGAGGCAGCAAAGAGGGCTTGGTCTGAAGATGGTTCATCCTATCTTGCACTTTCAAGAATCAGTCAGGCAAATGGTGCGTTATGA 1464 0.4686 MAASNSHNAAILTPPGMGHMIPSLELAKRLVTHQIVPKVTIFLASIKTSVPSKAETQLLQSATNDNLFQIIHLPPLDMTNLVGPDATIETQVAAITHELPPLFLSAISTTEHNPTILIIDQVLSNILPLVENLKVPKFIFVSSNAWLLALSLHTPILDKELQGEYTDQSEPISIPGCKSVHPDDVFQLLRDRTHKVYREYLSTCEGLALADAILVNTFNELEPKTLAALSSGKVTKVPVYPVGLIVREEIRRQDGSDVFEWLDKQEEESVVYISLGSGYRMSQEQIKEMALGLELSGQRFVWSLRTHAATKAGDAIANYFTAGKETQAETGGGVSKSEELNSLPDEFYRIQTRGMVITDWAPQLDILKHPSVGGFVSHCGWNSVMESVSCGVPIVGWPLYAEQGMNAAMLAEEIGIAVRLELPLSTNVVGREDLAKAIRKVMDKEDEEGCEMRKKVKELKEAAKRAWSEDGSSYLALSRISQANGAL* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3426 487 ProSitePatterns UDP-glycosyltransferases signature. 360 403 IPR035595 -
Lja3g3426 487 Gene3D Glycogen Phosphorylase B; 10 473 - -
Lja3g3426 487 PANTHER UDP-GLYCOSYLTRANSFERASE 72E1 4 482 - -
Lja3g3426 487 PANTHER GLYCOSYLTRANSFERASE 4 482 - -
Lja3g3426 487 CDD GT1_Gtf-like 8 466 IPR002213 GO:0008194
Lja3g3426 487 Gene3D Glycogen Phosphorylase B; 256 468 - -
Lja3g3426 487 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 256 445 IPR002213 GO:0008194
Lja3g3426 487 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3426 Lja-Chr3 67618593 67621463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3426 8 477 Glycosyltransferase AT2G18570 41.962 4.18e-130 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3426 K12356 - gmx:100807691 632.869